Variant report

Variant	rs72822592
Chromosome Location	chr10:97180509-97180510
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:97172533..97176944-chr10:97177871..97181883,5	K562	blood:
2	chr10:97168759..97171554-chr10:97179221..97181163,2	K562	blood:
3	chr10:97174123..97175647-chr10:97179560..97181813,2	K562	blood:

Variant related genes	Relation type
ENSG00000095637	Chromatin interaction

rs_ID	r²[population]
rs11188316	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs55846129	0.91[AMR][1000 genomes]
rs72824518	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes];0.98[EUR][1000 genomes]

Chromatin state (count:68 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97154400-97190800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr10:97156800-97182600	Weak transcription	Esophagus	oesophagus
3	chr10:97157000-97183200	Weak transcription	Colonic Mucosa	Colon
4	chr10:97157000-97190400	Weak transcription	Spleen	Spleen
5	chr10:97158600-97199600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr10:97159200-97187000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr10:97166400-97185800	Weak transcription	Fetal Lung	lung
8	chr10:97167200-97183200	Weak transcription	Duodenum Mucosa	Duodenum
9	chr10:97169600-97204800	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr10:97169800-97182800	Weak transcription	Stomach Mucosa	stomach
11	chr10:97170200-97184600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr10:97170600-97197800	Weak transcription	H9 Cell Line	embryonic stem cell
13	chr10:97171000-97186600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
14	chr10:97171000-97208000	Weak transcription	HUES64 Cell Line	embryonic stem cell
15	chr10:97173600-97185200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr10:97174600-97183600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr10:97175000-97189800	Weak transcription	Rectal Mucosa Donor 29	rectum
18	chr10:97175800-97183200	Weak transcription	Pancreas	Pancrea
19	chr10:97175800-97187200	Weak transcription	HUES6 Cell Line	embryonic stem cell
20	chr10:97175800-97204000	Weak transcription	Psoas Muscle	Psoas
21	chr10:97176000-97181000	Weak transcription	Brain Cingulate Gyrus	brain
22	chr10:97176000-97189000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr10:97176000-97196800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
24	chr10:97176000-97199200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
25	chr10:97176200-97181800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr10:97176200-97190400	Weak transcription	H1 Cell Line	embryonic stem cell
27	chr10:97176400-97181600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr10:97176600-97180800	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
29	chr10:97177000-97181600	Weak transcription	Right Atrium	heart
30	chr10:97177000-97182000	Weak transcription	Cortex derived primary cultured neurospheres	brain
31	chr10:97178400-97184000	Strong transcription	Fetal Muscle Leg	muscle
32	chr10:97178400-97188600	Strong transcription	Liver	Liver
33	chr10:97178600-97184400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
34	chr10:97178800-97184800	Strong transcription	Placenta	Placenta
35	chr10:97178800-97186200	Strong transcription	HepG2	liver
36	chr10:97178800-97198800	Genic enhancers	Colon Smooth Muscle	Colon
37	chr10:97179000-97182400	Strong transcription	Left Ventricle	heart
38	chr10:97179000-97182600	Enhancers	Fetal Heart	heart
39	chr10:97179200-97182200	Strong transcription	HUES48 Cell Line	embryonic stem cell
40	chr10:97179200-97187200	Strong transcription	HSMMtube	muscle
41	chr10:97179400-97180600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr10:97179600-97182200	Strong transcription	Skeletal Muscle Female	skeletal muscle
43	chr10:97180000-97180600	Strong transcription	Brain Germinal Matrix	brain
44	chr10:97180000-97180600	Genic enhancers	Fetal Stomach	stomach
45	chr10:97180000-97180800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr10:97180200-97180600	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr10:97180200-97180600	Genic enhancers	Aorta	Aorta
48	chr10:97180200-97180800	Genic enhancers	Brain Hippocampus Middle	brain
49	chr10:97180200-97181000	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr10:97180200-97181200	Enhancers	Fetal Brain Female	brain

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