The 2.0 version of rSNPBase

Variant report

Variant rs72825720
Chromosome Location chr2:99247508-99247509
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99227200-99257400 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr2:99230200-99250600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr2:99231200-99247600 Weak transcription Brain Angular Gyrus brain
4 chr2:99231200-99286200 Weak transcription Stomach Mucosa stomach
5 chr2:99232400-99249000 Weak transcription Psoas Muscle Psoas
6 chr2:99232400-99250600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr2:99232600-99249400 Weak transcription Aorta Aorta
8 chr2:99232800-99250000 Strong transcription Primary T helper cells fromperipheralblood blood
9 chr2:99233800-99247600 Weak transcription Spleen Spleen
10 chr2:99234000-99252800 Weak transcription Brain Germinal Matrix brain
11 chr2:99234200-99247600 Weak transcription Fetal Stomach stomach
12 chr2:99234400-99251000 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr2:99234600-99310600 Weak transcription Small Intestine intestine
14 chr2:99234800-99248400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr2:99234800-99250800 Weak transcription Fetal Muscle Leg muscle
16 chr2:99234800-99264600 Weak transcription Ovary ovary
17 chr2:99234800-99296400 Weak transcription Esophagus oesophagus
18 chr2:99235400-99248800 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr2:99235400-99273600 Weak transcription Fetal Kidney kidney
20 chr2:99236000-99248800 Weak transcription Liver Liver
21 chr2:99236000-99251200 Weak transcription Fetal Muscle Trunk muscle
22 chr2:99238200-99247600 Weak transcription Left Ventricle heart
23 chr2:99238200-99247600 Weak transcription Rectal Smooth Muscle rectum
24 chr2:99238400-99251200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr2:99238600-99256000 Weak transcription Primary B cells from cord blood blood
26 chr2:99238800-99249000 Weak transcription Brain Substantia Nigra brain
27 chr2:99239000-99248000 Weak transcription Placenta Placenta
28 chr2:99239000-99249000 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr2:99239000-99250400 Weak transcription Primary hematopoietic stem cells blood
30 chr2:99239200-99247600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr2:99239400-99248800 Weak transcription Colon Smooth Muscle Colon
32 chr2:99239400-99249000 Weak transcription HUVEC blood vessel
33 chr2:99240400-99248600 Strong transcription Primary T cells fromperipheralblood blood
34 chr2:99240400-99248600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr2:99243600-99265800 Strong transcription Duodenum Mucosa Duodenum
36 chr2:99244200-99249800 Strong transcription Fetal Thymus thymus
37 chr2:99244200-99257000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr2:99244200-99265600 Strong transcription Primary monocytes fromperipheralblood blood
39 chr2:99244400-99250400 Strong transcription Primary T cells from cord blood blood
40 chr2:99244800-99257000 Strong transcription Rectal Mucosa Donor 29 rectum
41 chr2:99244800-99265400 Strong transcription Primary neutrophils fromperipheralblood blood
42 chr2:99245000-99250600 Strong transcription Primary T helper cells PMA-I stimulated --
43 chr2:99245000-99256800 Strong transcription Rectal Mucosa Donor 31 rectum
44 chr2:99245000-99268000 Weak transcription Pancreatic Islets Pancreatic Islet
45 chr2:99245200-99247600 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr2:99245200-99250800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr2:99245200-99252800 Strong transcription Primary T regulatory cells fromperipheralblood blood
48 chr2:99245600-99248800 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr2:99246000-99249400 Strong transcription Primary T killer naive cells fromperipheralblood blood
50 chr2:99246000-99250600 Strong transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015