The 2.0 version of rSNPBase

Variant report

Variant rs72826082
Chromosome Location chr6:12097812-12097813
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:12061600-12105200 Weak transcription Duodenum Mucosa Duodenum
2 chr6:12061600-12109600 Weak transcription HUES6 Cell Line embryonic stem cell
3 chr6:12066400-12103600 Weak transcription Pancreas Pancrea
4 chr6:12066400-12107600 Weak transcription Fetal Muscle Leg muscle
5 chr6:12066800-12109600 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr6:12070800-12120400 Weak transcription Placenta Amnion Placenta Amnion
7 chr6:12071800-12098000 Weak transcription NH-A brain
8 chr6:12071800-12120400 Weak transcription HepG2 liver
9 chr6:12077800-12098000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr6:12077800-12113400 Weak transcription HMEC breast
11 chr6:12078000-12109800 Weak transcription Fetal Muscle Trunk muscle
12 chr6:12079200-12103600 Weak transcription Fetal Intestine Large intestine
13 chr6:12079400-12104600 Weak transcription Fetal Intestine Small intestine
14 chr6:12081800-12109800 Weak transcription Aorta Aorta
15 chr6:12082200-12111400 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr6:12082200-12111400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr6:12082200-12112800 Weak transcription Spleen Spleen
18 chr6:12084600-12109600 Weak transcription Primary B cells from peripheral blood blood
19 chr6:12084800-12098000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr6:12084800-12116600 Weak transcription HSMMtube muscle
21 chr6:12085800-12104000 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr6:12086000-12107600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr6:12086000-12109600 Weak transcription H1 Cell Line embryonic stem cell
24 chr6:12086000-12113200 Weak transcription Ovary ovary
25 chr6:12088600-12111000 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr6:12088800-12111400 Weak transcription Left Ventricle heart
27 chr6:12090200-12098000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr6:12090800-12109600 Weak transcription Primary B cells from cord blood blood
29 chr6:12091000-12103400 Weak transcription Right Atrium heart
30 chr6:12091000-12109600 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr6:12091000-12109600 Weak transcription HUVEC blood vessel
32 chr6:12091000-12118800 Weak transcription A549 lung
33 chr6:12091000-12130600 Weak transcription Psoas Muscle Psoas
34 chr6:12091200-12107400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr6:12091200-12111000 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr6:12091200-12111800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr6:12093000-12109600 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr6:12093200-12098200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr6:12093200-12101000 Weak transcription Primary T cells from cord blood blood
40 chr6:12093200-12109600 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr6:12093200-12109800 Weak transcription Fetal Thymus thymus
42 chr6:12093400-12100400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr6:12093400-12102000 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr6:12093400-12102000 Weak transcription K562 blood
45 chr6:12093400-12109600 Weak transcription HSMM muscle
46 chr6:12093400-12109800 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr6:12093400-12110800 Weak transcription Primary hematopoietic stem cells blood
48 chr6:12093600-12102000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr6:12094000-12099800 Weak transcription Fetal Lung lung
50 chr6:12095600-12099200 Weak transcription GM12878-XiMat blood

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Last update: Aug 31, 2015