Variant report

Variant	rs72826473
Chromosome Location	chr2:116354983-116354984
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs72842203	1.00[AMR][1000 genomes]
rs72842230	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014859	chr2:116196951-116938584	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv3388257	chr2:116348771-116365419	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:116353800-116357200	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr2:116353800-116364000	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr2:116354000-116355000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr2:116354000-116355000	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
5	chr2:116354000-116355000	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
6	chr2:116354200-116355000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr2:116354200-116355000	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
8	chr2:116354200-116355000	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
9	chr2:116354800-116355000	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr2:116354800-116355000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
11	chr2:116354800-116356200	Enhancers	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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