The 2.0 version of rSNPBase

Variant report

Variant rs72835140
Chromosome Location chr5:147050139-147050140
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:147009800-147051200 Weak transcription Fetal Muscle Trunk muscle
2 chr5:147016400-147052400 Weak transcription Primary B cells from cord blood blood
3 chr5:147025200-147053000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr5:147035800-147052800 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr5:147038800-147052200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr5:147038800-147053200 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr5:147039200-147051200 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr5:147039200-147052000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr5:147039600-147050600 Weak transcription Primary T cells fromperipheralblood blood
10 chr5:147039600-147061800 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr5:147040600-147050400 Weak transcription Fetal Thymus thymus
12 chr5:147041000-147052800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr5:147041000-147053000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr5:147041200-147050600 Weak transcription Fetal Stomach stomach
15 chr5:147042000-147076800 Weak transcription H9 Cell Line embryonic stem cell
16 chr5:147042400-147051000 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr5:147046000-147050600 Enhancers Liver Liver
18 chr5:147046000-147052000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr5:147046600-147051600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr5:147046800-147051600 Strong transcription Primary T cells from cord blood blood
21 chr5:147047000-147052800 Weak transcription Stomach Mucosa stomach
22 chr5:147047400-147051400 Strong transcription H1 Cell Line embryonic stem cell
23 chr5:147047400-147051400 Strong transcription HUES48 Cell Line embryonic stem cell
24 chr5:147047600-147050600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr5:147047600-147050600 Weak transcription Fetal Intestine Small intestine
26 chr5:147047600-147051600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr5:147047800-147051400 Strong transcription iPS-20b Cell Line embryonic stem cell
28 chr5:147048000-147052800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr5:147048200-147051800 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr5:147048400-147050600 Weak transcription HepG2 liver
31 chr5:147049000-147051600 Strong transcription iPS-18 Cell Line embryonic stem cell
32 chr5:147049000-147051600 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr5:147049000-147051800 Strong transcription Primary hematopoietic stem cells blood
34 chr5:147049000-147052000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr5:147049200-147050600 Weak transcription Fetal Intestine Large intestine
36 chr5:147049200-147051600 Strong transcription HUES64 Cell Line embryonic stem cell
37 chr5:147049200-147053000 Weak transcription Left Ventricle heart
38 chr5:147049400-147050200 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr5:147049400-147050600 Weak transcription Brain Cingulate Gyrus brain
40 chr5:147049400-147050600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr5:147049400-147050600 Weak transcription Brain Substantia Nigra brain
42 chr5:147049400-147050800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr5:147049400-147051800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr5:147049400-147053000 Weak transcription Gastric stomach
45 chr5:147049400-147054000 Weak transcription Stomach Smooth Muscle stomach
46 chr5:147049600-147050200 Weak transcription Brain Inferior Temporal Lobe brain
47 chr5:147049600-147050400 Weak transcription Brain Angular Gyrus brain
48 chr5:147049600-147050400 Weak transcription Brain Anterior Caudate brain
49 chr5:147049600-147050400 Weak transcription Brain Hippocampus Middle brain
50 chr5:147049600-147050400 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015