Variant report

Variant rs7283588
Chromosome Location chr21:48059038-48059039
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:48056200-48061200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr21:48056200-48061200 Weak transcription Lung lung
3 chr21:48056200-48063000 Weak transcription Pancreas Pancrea
4 chr21:48056200-48065800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr21:48056200-48068200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr21:48056200-48081400 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr21:48056400-48059800 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr21:48056400-48063000 Weak transcription Colonic Mucosa Colon
9 chr21:48056400-48063000 Weak transcription Ovary ovary
10 chr21:48056600-48061200 Weak transcription H9 Cell Line embryonic stem cell
11 chr21:48056600-48063400 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr21:48056600-48063400 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr21:48056800-48074000 Strong transcription HUES64 Cell Line embryonic stem cell
14 chr21:48057000-48059600 Genic enhancers Primary B cells from cord blood blood
15 chr21:48057000-48068400 Weak transcription Stomach Mucosa stomach
16 chr21:48057200-48059800 Enhancers Primary neutrophils fromperipheralblood blood
17 chr21:48057200-48060200 Weak transcription Placenta Placenta
18 chr21:48057200-48061000 Weak transcription Esophagus oesophagus
19 chr21:48057200-48061000 Weak transcription Fetal Kidney kidney
20 chr21:48057200-48061200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr21:48057200-48061200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr21:48057600-48059800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
23 chr21:48058200-48060800 Weak transcription Fetal Stomach stomach
24 chr21:48058200-48068400 Weak transcription Psoas Muscle Psoas
25 chr21:48058400-48059200 Enhancers Colon Smooth Muscle Colon
26 chr21:48058400-48059400 Enhancers Rectal Smooth Muscle rectum
27 chr21:48058400-48059600 Enhancers Fetal Heart heart
28 chr21:48058400-48060200 Enhancers Brain Angular Gyrus brain
29 chr21:48058400-48060800 Weak transcription Fetal Intestine Large intestine
30 chr21:48058400-48060800 Weak transcription Fetal Thymus thymus
31 chr21:48058400-48061000 Weak transcription Thymus Thymus
32 chr21:48058400-48061400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr21:48058600-48059200 Active TSS Primary T killer naive cells fromperipheralblood blood
34 chr21:48058600-48059200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
35 chr21:48058600-48059400 Weak transcription Fetal Lung lung
36 chr21:48058600-48059400 Weak transcription HepG2 liver
37 chr21:48058600-48059600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr21:48058600-48059600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr21:48058600-48059600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr21:48058600-48059600 Enhancers Brain Hippocampus Middle brain
41 chr21:48058600-48059600 Weak transcription Brain Inferior Temporal Lobe brain
42 chr21:48058600-48059600 Weak transcription Brain Substantia Nigra brain
43 chr21:48058600-48059600 Weak transcription A549 lung
44 chr21:48058600-48059800 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
45 chr21:48058600-48059800 Weak transcription Primary T cells fromperipheralblood blood
46 chr21:48058600-48059800 Genic enhancers Primary hematopoietic stem cells short term culture blood
47 chr21:48058600-48059800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr21:48058600-48059800 Enhancers Brain Anterior Caudate brain
49 chr21:48058600-48059800 Enhancers HUVEC blood vessel
50 chr21:48058600-48059800 Genic enhancers NH-A brain

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