The 2.0 version of rSNPBase

Variant report

Variant rs72840508
Chromosome Location chr6:25624400-25624401
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:25577200-25624800 Weak transcription Adipose Nuclei Adipose
2 chr6:25582000-25626800 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr6:25585000-25627000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr6:25585200-25629400 Weak transcription Pancreas Pancrea
5 chr6:25592400-25625600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr6:25594200-25629200 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr6:25594400-25627200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr6:25594600-25627200 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr6:25594600-25629600 Weak transcription H9 Cell Line embryonic stem cell
10 chr6:25594800-25624600 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr6:25595000-25626800 Weak transcription H1 Cell Line embryonic stem cell
12 chr6:25595000-25627000 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr6:25601600-25626400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr6:25609400-25627000 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr6:25611600-25625200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr6:25612800-25626800 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr6:25613200-25631000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr6:25619200-25625800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr6:25619400-25625000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr6:25619800-25628600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr6:25620200-25624400 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr6:25621600-25624600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr6:25621800-25624600 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr6:25622200-25624400 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr6:25622200-25624800 Weak transcription Fetal Intestine Large intestine
26 chr6:25622200-25624800 Weak transcription Fetal Lung lung
27 chr6:25622400-25625600 Weak transcription Duodenum Mucosa Duodenum
28 chr6:25622600-25625400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr6:25622800-25626400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr6:25622800-25626400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr6:25622800-25627600 Weak transcription Aorta Aorta
32 chr6:25622800-25634800 Weak transcription Fetal Intestine Small intestine
33 chr6:25623000-25627200 Weak transcription Primary T cells from cord blood blood
34 chr6:25623200-25624600 Enhancers Fetal Brain Female brain
35 chr6:25623200-25625400 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr6:25623400-25627200 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr6:25623600-25624400 Enhancers Ovary ovary
38 chr6:25623600-25624600 Enhancers Fetal Brain Male brain
39 chr6:25623600-25625200 Enhancers Pancreatic Islets Pancreatic Islet
40 chr6:25624000-25624400 Enhancers Fetal Kidney kidney
41 chr6:25624200-25624400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
42 chr6:25624200-25626800 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015