The 2.0 version of rSNPBase

Variant report

Variant rs72846785
Chromosome Location chr6:28126706-28126707
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:28111400-28129200 Weak transcription Right Atrium heart
2 chr6:28111800-28127000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr6:28113200-28127200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr6:28115200-28127200 Strong transcription Fetal Brain Female brain
5 chr6:28115400-28127000 Strong transcription Breast Myoepithelial Primary Cells Breast
6 chr6:28115400-28127000 Strong transcription Fetal Muscle Trunk muscle
7 chr6:28115800-28127400 Strong transcription Skeletal Muscle Female skeletal muscle
8 chr6:28116000-28126800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr6:28116000-28127000 Strong transcription Brain Hippocampus Middle brain
10 chr6:28116000-28127200 Strong transcription Stomach Smooth Muscle stomach
11 chr6:28116200-28127000 Strong transcription Fetal Lung lung
12 chr6:28121400-28127000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr6:28121400-28127200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr6:28121600-28129000 Weak transcription Fetal Intestine Small intestine
15 chr6:28121600-28129200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr6:28121800-28127000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr6:28121800-28127000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr6:28121800-28127400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr6:28121800-28127400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr6:28121800-28129200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr6:28122000-28129200 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr6:28122000-28129200 Weak transcription Stomach Mucosa stomach
23 chr6:28122200-28127600 Strong transcription Primary hematopoietic stem cells short term culture blood
24 chr6:28122200-28129000 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr6:28122200-28129000 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr6:28122200-28129200 Weak transcription Small Intestine intestine
27 chr6:28122600-28129000 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr6:28122600-28129200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr6:28122600-28129200 Weak transcription Esophagus oesophagus
30 chr6:28122600-28129200 Weak transcription Fetal Stomach stomach
31 chr6:28122800-28129200 Weak transcription Colonic Mucosa Colon
32 chr6:28122800-28129200 Weak transcription Gastric stomach
33 chr6:28122800-28129200 Weak transcription HSMMtube muscle
34 chr6:28122800-28129400 Weak transcription Spleen Spleen
35 chr6:28123000-28128000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr6:28123000-28129000 Weak transcription iPS-15b Cell Line embryonic stem cell
37 chr6:28123000-28129200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr6:28123000-28129200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr6:28123000-28129200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr6:28123000-28129200 Weak transcription Lung lung
41 chr6:28123000-28129200 Weak transcription Pancreas Pancrea
42 chr6:28123000-28129200 Weak transcription Rectal Smooth Muscle rectum
43 chr6:28123000-28129200 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr6:28123000-28129200 Weak transcription Hela-S3 cervix
45 chr6:28123200-28129200 Weak transcription H9 Cell Line embryonic stem cell
46 chr6:28123200-28129200 Weak transcription Brain Cingulate Gyrus brain
47 chr6:28123200-28129200 Weak transcription Fetal Thymus thymus
48 chr6:28123400-28129000 Weak transcription HMEC breast
49 chr6:28123400-28129200 Weak transcription Brain Angular Gyrus brain
50 chr6:28123400-28129200 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015