Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs17200365	0.95[ASN][1000 genomes]
rs17200372	0.95[ASN][1000 genomes]
rs17206736	0.95[ASN][1000 genomes]
rs17206757	0.95[ASN][1000 genomes]
rs55691135	1.00[AMR][1000 genomes]
rs55857629	1.00[AMR][1000 genomes]
rs55945137	0.95[ASN][1000 genomes]
rs56129747	0.95[ASN][1000 genomes]
rs56180073	1.00[AMR][1000 genomes]
rs56241874	1.00[AMR][1000 genomes]
rs56365848	0.87[ASN][1000 genomes]
rs56370321	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs56414040	0.90[ASN][1000 genomes]
rs58138383	0.95[ASN][1000 genomes]
rs67140765	0.95[ASN][1000 genomes]
rs68104617	0.95[ASN][1000 genomes]
rs6909424	0.90[ASN][1000 genomes]
rs6909760	0.95[ASN][1000 genomes]
rs6932191	0.92[ASN][1000 genomes]
rs72841203	1.00[AMR][1000 genomes]
rs72845865	1.00[AMR][1000 genomes]
rs72847203	1.00[AMR][1000 genomes]
rs72847235	1.00[AMR][1000 genomes]
rs72847395	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72847397	0.95[ASN][1000 genomes]
rs72847400	0.95[ASN][1000 genomes]
rs72848706	0.95[ASN][1000 genomes]
rs72851111	1.00[AMR][1000 genomes]
rs72851199	1.00[AMR][1000 genomes]
rs73402222	0.95[ASN][1000 genomes]
rs9266801	0.90[ASN][1000 genomes]
rs9266841	0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv521471	chrX:68943681-69127562	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	esv3395470	chrX:68984135-69124357	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv497962	chrX:69059438-69521671	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:69087000-69105800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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