Variant report

Variant rs72850279
Chromosome Location chr6:32551494-32551495
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32543800-32551800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr6:32545200-32552600 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr6:32546800-32552200 Weak transcription Placenta Amnion Placenta Amnion
4 chr6:32547000-32552800 Weak transcription Primary hematopoietic stem cells blood
5 chr6:32547200-32551600 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr6:32548600-32551800 Weak transcription Right Ventricle heart
7 chr6:32548600-32552600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr6:32549600-32556200 Weak transcription Spleen Spleen
9 chr6:32549800-32552200 Strong transcription Primary monocytes fromperipheralblood blood
10 chr6:32550000-32551600 Weak transcription Right Atrium heart
11 chr6:32550000-32553000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr6:32550400-32551600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr6:32550400-32553800 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr6:32551000-32551800 Weak transcription Primary B cells from cord blood blood
15 chr6:32551200-32551600 Enhancers Primary T cells from cord blood blood
16 chr6:32551200-32552200 Bivalent Enhancer Fetal Brain Male brain
17 chr6:32551200-32557600 Active TSS Rectal Mucosa Donor 29 rectum
18 chr6:32551400-32551600 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
19 chr6:32551400-32551600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr6:32551400-32551600 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
21 chr6:32551400-32551600 Active TSS HUES64 Cell Line embryonic stem cell
22 chr6:32551400-32551600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr6:32551400-32551600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
24 chr6:32551400-32551600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
25 chr6:32551400-32551600 Enhancers Primary T helper cells fromperipheralblood blood
26 chr6:32551400-32551600 Flanking Bivalent TSS/Enh Brain Hippocampus Middle brain
27 chr6:32551400-32551600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
28 chr6:32551400-32551800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
29 chr6:32551400-32551800 Flanking Active TSS Adipose Nuclei Adipose
30 chr6:32551400-32551800 Enhancers Esophagus oesophagus
31 chr6:32551400-32551800 Enhancers Gastric stomach
32 chr6:32551400-32551800 Enhancers Pancreas Pancrea
33 chr6:32551400-32551800 Flanking Active TSS Stomach Mucosa stomach
34 chr6:32551400-32551800 Transcr. at gene 5' and 3' GM12878-XiMat blood
35 chr6:32551400-32552000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr6:32551400-32552000 Bivalent Enhancer Fetal Muscle Trunk muscle
37 chr6:32551400-32552000 Bivalent Enhancer Fetal Thymus thymus
38 chr6:32551400-32552200 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
39 chr6:32551400-32552400 Active TSS iPS-15b Cell Line embryonic stem cell
40 chr6:32551400-32552400 Enhancers Primary T cells fromperipheralblood blood
41 chr6:32551400-32552400 Active TSS Primary T regulatory cells fromperipheralblood blood
42 chr6:32551400-32552400 Bivalent Enhancer Fetal Muscle Leg muscle
43 chr6:32551400-32552400 Active TSS Lung lung
44 chr6:32551400-32552600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr6:32551400-32552600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr6:32551400-32552600 Active TSS iPS-18 Cell Line embryonic stem cell
47 chr6:32551400-32552600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
48 chr6:32551400-32552600 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
49 chr6:32551400-32552600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr6:32551400-32552600 Active TSS Breast Myoepithelial Primary Cells Breast

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