Variant report

Variant	rs72856369
Chromosome Location	chr2:31359313-31359314
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs56104208	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948552	chr2:31118599-31595424	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:31350000-31359600	Weak transcription	Pancreas	Pancrea
2	chr2:31351600-31359600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr2:31353400-31359600	Weak transcription	Spleen	Spleen
4	chr2:31358600-31359600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr2:31358800-31359400	Enhancers	A549	lung
6	chr2:31358800-31359600	Active TSS	Breast Myoepithelial Primary Cells	Breast
7	chr2:31358800-31359800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr2:31359000-31359400	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
9	chr2:31359000-31359600	Enhancers	Brain Germinal Matrix	brain
10	chr2:31359200-31359400	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
11	chr2:31359200-31359400	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
12	chr2:31359200-31359400	Bivalent/Poised TSS	Primary hematopoietic stem cells	blood
13	chr2:31359200-31359600	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr2:31359200-31359600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr2:31359200-31359800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr2:31359200-31359800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr2:31359200-31359800	Flanking Active TSS	HMEC	breast
18	chr2:31359200-31360000	Flanking Active TSS	NHEK	skin
19	chr2:31359200-31360400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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