The 2.0 version of rSNPBase

Variant report

Variant rs72858032
Chromosome Location chr2:33447696-33447697
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33403800-33489800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:33414600-33455400 Weak transcription Fetal Stomach stomach
3 chr2:33436800-33455000 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr2:33442600-33452200 Weak transcription Fetal Muscle Leg muscle
5 chr2:33442600-33467600 Weak transcription Ovary ovary
6 chr2:33442800-33453400 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr2:33442800-33471400 Weak transcription Psoas Muscle Psoas
8 chr2:33444800-33448400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr2:33444800-33448400 Enhancers HMEC breast
10 chr2:33445600-33449200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr2:33446000-33448400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr2:33446000-33448600 Strong transcription Muscle Satellite Cultured Cells --
13 chr2:33446000-33455000 Weak transcription Fetal Kidney kidney
14 chr2:33446200-33448600 Strong transcription Osteobl bone
15 chr2:33446400-33447800 Strong transcription NHDF-Ad bronchial
16 chr2:33446400-33448000 Strong transcription NH-A brain
17 chr2:33446400-33448800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr2:33446400-33449400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr2:33446400-33450400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr2:33446400-33451200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr2:33446400-33452600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr2:33446600-33447800 Weak transcription Fetal Heart heart
23 chr2:33446600-33448200 Strong transcription Liver Liver
24 chr2:33446600-33449000 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr2:33446600-33451200 Weak transcription K562 blood
26 chr2:33446600-33454800 Weak transcription A549 lung
27 chr2:33446600-33461200 Weak transcription HUVEC blood vessel
28 chr2:33446800-33448000 Weak transcription NHLF lung
29 chr2:33446800-33461200 Weak transcription Fetal Lung lung
30 chr2:33447000-33448200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr2:33447000-33449200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr2:33447000-33449400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr2:33447000-33449400 Enhancers NHEK skin
34 chr2:33447200-33447800 Genic enhancers Aorta Aorta
35 chr2:33447200-33448400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr2:33447200-33449200 Strong transcription Left Ventricle heart
37 chr2:33447400-33468200 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr2:33447600-33447800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr2:33447600-33448800 Weak transcription Placenta Placenta
40 chr2:33447600-33449200 Strong transcription Stomach Smooth Muscle stomach
41 chr2:33447600-33452600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015