Variant report

Variant	rs72860111
Chromosome Location	chr4:77185176-77185177
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:77133904..77135705-chr4:77183809..77185526,2	MCF-7	breast:
2	chr4:77185052..77186767-chr4:77189879..77191604,2	K562	blood:

Variant related genes	Relation type
ENSG00000189157	Chromatin interaction
ENSG00000138760	Chromatin interaction

rs_ID	r²[population]
rs1837871	0.94[ASN][1000 genomes]
rs3733251	1.00[ASN][1000 genomes]
rs66820534	0.93[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs67373731	0.94[ASN][1000 genomes]
rs72655587	1.00[ASN][1000 genomes]
rs72860114	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72860117	0.93[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73828719	0.89[ASN][1000 genomes]

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:77173600-77202000	Weak transcription	Psoas Muscle	Psoas
2	chr4:77173800-77185200	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr4:77173800-77185400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr4:77173800-77185400	Weak transcription	Brain Anterior Caudate	brain
5	chr4:77173800-77186000	Weak transcription	Pancreas	Pancrea
6	chr4:77173800-77191400	Weak transcription	Brain Cingulate Gyrus	brain
7	chr4:77173800-77196000	Weak transcription	Adipose Nuclei	Adipose
8	chr4:77173800-77215800	Weak transcription	Brain Hippocampus Middle	brain
9	chr4:77174000-77185600	Weak transcription	Brain Angular Gyrus	brain
10	chr4:77174200-77186000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr4:77176200-77186400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr4:77177800-77185400	Weak transcription	Aorta	Aorta
13	chr4:77177800-77199200	Weak transcription	Placenta	Placenta
14	chr4:77178800-77185200	Weak transcription	Fetal Intestine Large	intestine
15	chr4:77178800-77201200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr4:77179000-77186800	Weak transcription	Brain Substantia Nigra	brain
17	chr4:77179400-77185400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
18	chr4:77180000-77202000	Weak transcription	Gastric	stomach
19	chr4:77180200-77185400	Weak transcription	Fetal Intestine Small	intestine
20	chr4:77182000-77194600	Weak transcription	Stomach Mucosa	stomach
21	chr4:77182400-77193400	Weak transcription	Pancreatic Islets	Pancreatic Islet
22	chr4:77183200-77193000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr4:77183800-77186000	Weak transcription	Stomach Smooth Muscle	stomach
24	chr4:77185000-77188600	Strong transcription	Brain Inferior Temporal Lobe	brain
25	chr4:77185000-77189000	Weak transcription	Right Ventricle	heart
26	chr4:77185000-77192600	Weak transcription	Left Ventricle	heart

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