The 2.0 version of rSNPBase

Variant report

Variant rs72881916
Chromosome Location chr2:172619268-172619269
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172587800-172640800 Weak transcription Psoas Muscle Psoas
2 chr2:172588400-172619800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr2:172593200-172645000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr2:172602000-172624200 Weak transcription Esophagus oesophagus
5 chr2:172602600-172621800 Weak transcription H9 Cell Line embryonic stem cell
6 chr2:172603000-172688400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr2:172603400-172621200 Weak transcription Small Intestine intestine
8 chr2:172604400-172641200 Weak transcription Colon Smooth Muscle Colon
9 chr2:172605600-172622400 Weak transcription Primary T cells fromperipheralblood blood
10 chr2:172605800-172620600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr2:172606200-172620000 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr2:172606400-172619400 Weak transcription NHEK skin
13 chr2:172607400-172627000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr2:172608800-172619600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr2:172609000-172622200 Weak transcription Fetal Brain Male brain
16 chr2:172609200-172620400 Weak transcription Primary B cells from peripheral blood blood
17 chr2:172609600-172628800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr2:172609800-172620600 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr2:172610200-172651400 Weak transcription Placenta Amnion Placenta Amnion
20 chr2:172610400-172620000 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr2:172610600-172619600 Weak transcription HMEC breast
22 chr2:172610800-172619600 Weak transcription Brain Hippocampus Middle brain
23 chr2:172611200-172619400 Weak transcription HUVEC blood vessel
24 chr2:172615400-172623800 Weak transcription Fetal Lung lung
25 chr2:172616200-172619400 Strong transcription Fetal Adrenal Gland Adrenal Gland
26 chr2:172616400-172619400 Strong transcription Primary hematopoietic stem cells short term culture blood
27 chr2:172616400-172619400 Strong transcription Fetal Muscle Leg muscle
28 chr2:172616400-172620400 Strong transcription Fetal Muscle Trunk muscle
29 chr2:172616600-172619400 Strong transcription Primary neutrophils fromperipheralblood blood
30 chr2:172616600-172619800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr2:172616800-172619400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr2:172616800-172619400 Strong transcription Fetal Thymus thymus
33 chr2:172616800-172619600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr2:172616800-172619800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr2:172616800-172619800 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr2:172616800-172620800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr2:172617000-172619400 Strong transcription Primary monocytes fromperipheralblood blood
38 chr2:172617000-172619800 Strong transcription Cortex derived primary cultured neurospheres brain
39 chr2:172617000-172620200 Strong transcription Fetal Stomach stomach
40 chr2:172617200-172619400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr2:172617200-172619400 Strong transcription Osteobl bone
42 chr2:172617200-172619600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr2:172617200-172619600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr2:172617200-172620200 Strong transcription Liver Liver
45 chr2:172617200-172620800 Strong transcription Left Ventricle heart
46 chr2:172617600-172619800 Weak transcription Primary B cells from cord blood blood
47 chr2:172618000-172619400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr2:172618000-172619800 Weak transcription H1 Cell Line embryonic stem cell
49 chr2:172618000-172620200 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr2:172618000-172620200 Strong transcription Fetal Intestine Small intestine

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015