The 2.0 version of rSNPBase

Variant report

Variant rs72881919
Chromosome Location chr2:172620937-172620938
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172587800-172640800 Weak transcription Psoas Muscle Psoas
2 chr2:172593200-172645000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr2:172602000-172624200 Weak transcription Esophagus oesophagus
4 chr2:172602600-172621800 Weak transcription H9 Cell Line embryonic stem cell
5 chr2:172603000-172688400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr2:172603400-172621200 Weak transcription Small Intestine intestine
7 chr2:172604400-172641200 Weak transcription Colon Smooth Muscle Colon
8 chr2:172605600-172622400 Weak transcription Primary T cells fromperipheralblood blood
9 chr2:172607400-172627000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr2:172609000-172622200 Weak transcription Fetal Brain Male brain
11 chr2:172609600-172628800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr2:172610200-172651400 Weak transcription Placenta Amnion Placenta Amnion
13 chr2:172615400-172623800 Weak transcription Fetal Lung lung
14 chr2:172618000-172626400 Weak transcription Primary hematopoietic stem cells blood
15 chr2:172618000-172639600 Weak transcription Fetal Heart heart
16 chr2:172618200-172621000 Weak transcription Ovary ovary
17 chr2:172618400-172621000 Strong transcription GM12878-XiMat blood
18 chr2:172618400-172639800 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr2:172618400-172641000 Weak transcription Aorta Aorta
20 chr2:172618600-172622200 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr2:172618800-172621000 Strong transcription NHLF lung
22 chr2:172618800-172621400 Weak transcription Colonic Mucosa Colon
23 chr2:172618800-172625800 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr2:172618800-172640800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr2:172619000-172621200 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr2:172619000-172622400 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr2:172619000-172623400 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr2:172619000-172624400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr2:172619000-172627800 Weak transcription Dnd41 blood
30 chr2:172619000-172630600 Weak transcription Lung lung
31 chr2:172619000-172638800 Weak transcription Primary T cells from cord blood blood
32 chr2:172619000-172641000 Weak transcription Spleen Spleen
33 chr2:172619200-172621000 Weak transcription Fetal Brain Female brain
34 chr2:172619200-172623400 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr2:172619200-172623600 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr2:172619200-172624000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr2:172619200-172624000 Weak transcription Brain Germinal Matrix brain
38 chr2:172619200-172624200 Weak transcription Right Ventricle heart
39 chr2:172619200-172627000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr2:172619200-172632400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr2:172619200-172634600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr2:172619200-172635000 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr2:172619200-172635200 Weak transcription A549 lung
44 chr2:172619200-172638600 Weak transcription Stomach Smooth Muscle stomach
45 chr2:172619200-172640800 Weak transcription Rectal Smooth Muscle rectum
46 chr2:172619200-172641000 Weak transcription Thymus Thymus
47 chr2:172619200-172641600 Weak transcription Gastric stomach
48 chr2:172619200-172641800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr2:172619400-172621000 Weak transcription Primary monocytes fromperipheralblood blood
50 chr2:172619400-172621000 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015