Variant report
| Variant | rs72890406 |
|---|---|
| Chromosome Location | chr3:61590634-61590635 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:61564600-61593400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 2 | chr3:61569600-61594400 | Weak transcription | Pancreas | Pancrea |
| 3 | chr3:61575800-61591400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 4 | chr3:61577400-61591200 | Weak transcription | Aorta | Aorta |
| 5 | chr3:61580400-61591400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 6 | chr3:61580400-61597800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 7 | chr3:61580600-61594000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 8 | chr3:61581000-61609000 | Weak transcription | NHEK | skin |
| 9 | chr3:61581400-61612200 | Weak transcription | NHLF | lung |
| 10 | chr3:61581400-61613400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 11 | chr3:61581600-61591400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 12 | chr3:61581800-61591400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 13 | chr3:61581800-61592600 | Weak transcription | Liver | Liver |
| 14 | chr3:61581800-61597800 | Weak transcription | Colon Smooth Muscle | Colon |
| 15 | chr3:61582000-61599400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 16 | chr3:61583400-61591400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 17 | chr3:61583800-61598000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 18 | chr3:61584200-61591200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 19 | chr3:61584400-61591400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 20 | chr3:61584400-61597600 | Weak transcription | Adipose Nuclei | Adipose |
| 21 | chr3:61584400-61602200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 22 | chr3:61584600-61598000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 23 | chr3:61584600-61598200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 24 | chr3:61584600-61602200 | Weak transcription | Ovary | ovary |
| 25 | chr3:61586400-61614200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 26 | chr3:61586600-61602200 | Weak transcription | Fetal Intestine Large | intestine |
| 27 | chr3:61587000-61611400 | Weak transcription | HepG2 | liver |
| 28 | chr3:61587600-61594000 | Weak transcription | Brain Angular Gyrus | brain |
| 29 | chr3:61587800-61602600 | Weak transcription | HSMMtube | muscle |
| 30 | chr3:61587800-61602800 | Weak transcription | Gastric | stomach |
| 31 | chr3:61588200-61597800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 32 | chr3:61588200-61597800 | Weak transcription | Psoas Muscle | Psoas |
| 33 | chr3:61588400-61591200 | Weak transcription | Left Ventricle | heart |
| 34 | chr3:61588400-61592200 | Weak transcription | Fetal Lung | lung |
| 35 | chr3:61588400-61593400 | Weak transcription | Right Ventricle | heart |
| 36 | chr3:61588600-61591800 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 37 | chr3:61589000-61591400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 38 | chr3:61589000-61591800 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 39 | chr3:61589000-61593000 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 40 | chr3:61589000-61594000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 41 | chr3:61589000-61598000 | Weak transcription | Fetal Heart | heart |
| 42 | chr3:61589400-61592200 | Strong transcription | H9 Cell Line | embryonic stem cell |
| 43 | chr3:61589400-61594800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 44 | chr3:61589600-61591200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 45 | chr3:61589600-61591200 | Weak transcription | Fetal Intestine Small | intestine |
| 46 | chr3:61589600-61591400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 47 | chr3:61589600-61591600 | Weak transcription | HSMM | muscle |
| 48 | chr3:61589600-61592000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 49 | chr3:61589600-61593800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 50 | chr3:61589600-61594000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
