The 2.0 version of rSNPBase

Variant report

Variant rs72903148
Chromosome Location chr2:187470190-187470191
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:187456000-187470600 Weak transcription Primary T helper naive cells fromperipheralblood blood
2 chr2:187456000-187488200 Weak transcription Primary T cells fromperipheralblood blood
3 chr2:187456200-187508600 Weak transcription Esophagus oesophagus
4 chr2:187456200-187533000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr2:187456400-187488200 Weak transcription Fetal Thymus thymus
6 chr2:187456400-187504000 Weak transcription Fetal Muscle Trunk muscle
7 chr2:187456600-187514000 Weak transcription Thymus Thymus
8 chr2:187456600-187520000 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr2:187456800-187493400 Weak transcription Brain Germinal Matrix brain
10 chr2:187456800-187534400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr2:187457200-187506000 Weak transcription Liver Liver
12 chr2:187457200-187533800 Weak transcription Spleen Spleen
13 chr2:187457400-187472200 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr2:187458000-187511400 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr2:187458000-187529000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr2:187458600-187477000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr2:187459400-187470800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr2:187459400-187505600 Weak transcription NHLF lung
19 chr2:187460200-187477200 Weak transcription GM12878-XiMat blood
20 chr2:187460200-187506200 Weak transcription Small Intestine intestine
21 chr2:187460800-187475600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr2:187460800-187486800 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr2:187462000-187471800 Weak transcription HMEC breast
24 chr2:187462000-187477600 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr2:187462600-187471000 Weak transcription Aorta Aorta
26 chr2:187462600-187475800 Weak transcription Lung lung
27 chr2:187462600-187500600 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr2:187462800-187515400 Weak transcription Gastric stomach
29 chr2:187464000-187471000 Weak transcription Adipose Nuclei Adipose
30 chr2:187464400-187477000 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr2:187464800-187472600 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr2:187464800-187536200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr2:187465000-187473400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr2:187465200-187470600 Weak transcription Stomach Mucosa stomach
35 chr2:187465800-187529200 Weak transcription Dnd41 blood
36 chr2:187466600-187472400 Strong transcription HepG2 liver
37 chr2:187466800-187471400 Strong transcription Fetal Intestine Large intestine
38 chr2:187466800-187473000 Strong transcription HUES64 Cell Line embryonic stem cell
39 chr2:187466800-187533200 Weak transcription Colonic Mucosa Colon
40 chr2:187467000-187474200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr2:187467200-187470400 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr2:187467200-187528600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr2:187467400-187515800 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr2:187467600-187506000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr2:187468000-187470400 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr2:187468000-187471200 Strong transcription Monocytes-CD14+_RO01746 blood
47 chr2:187468000-187472200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr2:187468400-187471800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr2:187468800-187470200 Enhancers Cortex derived primary cultured neurospheres brain
50 chr2:187468800-187471600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015