Variant report

Variant	rs72916152
Chromosome Location	chr3:68717613-68717614
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs6763488	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72916142	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72916143	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72916147	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1009857	chr3:68696340-68746434	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1007568	chr3:68714009-68747401	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1005544	chr3:68715718-68747401	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68715400-68717800	Enhancers	Colon Smooth Muscle	Colon
2	chr3:68716400-68719400	Weak transcription	Aorta	Aorta
3	chr3:68716800-68718800	Weak transcription	Fetal Stomach	stomach
4	chr3:68717400-68719000	Weak transcription	Fetal Brain Female	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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