Variant report

Variant	rs72916272
Chromosome Location	chr1:56819095-56819096
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs72912284	1.00[AMR][1000 genomes]
rs72912291	1.00[AMR][1000 genomes]
rs72912299	1.00[AMR][1000 genomes]
rs72914116	1.00[AMR][1000 genomes]
rs72916210	1.00[AMR][1000 genomes]
rs72916246	1.00[AMR][1000 genomes]
rs72916248	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72916249	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72916251	1.00[AMR][1000 genomes]
rs72918314	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1006422	chr1:56734772-56828606	Flanking Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv534972	chr1:56734772-56828606	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv932	chr1:56816732-56842261	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56791200-56820800	Weak transcription	Aorta	Aorta
2	chr1:56818600-56820600	Weak transcription	Left Ventricle	heart
3	chr1:56818800-56820800	Enhancers	Skeletal Muscle Female	skeletal muscle
4	chr1:56819000-56819200	Enhancers	Skeletal Muscle Male	skeletal muscle
5	chr1:56819000-56820600	Weak transcription	Psoas Muscle	Psoas

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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