The 2.0 version of rSNPBase

Variant report

Variant rs72916358
Chromosome Location chr1:67042645-67042646
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67038000-67043400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr1:67040200-67044200 Enhancers Fetal Heart heart
3 chr1:67040600-67043200 Enhancers Fetal Lung lung
4 chr1:67040600-67044200 Enhancers NHLF lung
5 chr1:67040800-67042800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:67040800-67043200 Enhancers NHEK skin
7 chr1:67040800-67044000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:67040800-67044800 Enhancers NHDF-Ad bronchial
9 chr1:67041000-67042800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:67041000-67043400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
11 chr1:67041400-67042800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr1:67041400-67043000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
13 chr1:67041400-67043200 Enhancers Brain Angular Gyrus brain
14 chr1:67041400-67043200 Enhancers Brain Inferior Temporal Lobe brain
15 chr1:67041400-67043600 Enhancers Brain Hippocampus Middle brain
16 chr1:67041400-67044200 Enhancers NH-A brain
17 chr1:67041400-67045600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
18 chr1:67041600-67042800 Enhancers Fetal Stomach stomach
19 chr1:67041600-67043200 Enhancers Placenta Amnion Placenta Amnion
20 chr1:67041600-67043600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:67041600-67043600 Enhancers Brain Substantia Nigra brain
22 chr1:67041600-67062400 Weak transcription Stomach Smooth Muscle stomach
23 chr1:67042000-67042800 Enhancers Placenta Placenta
24 chr1:67042000-67042800 Enhancers Fetal Thymus thymus
25 chr1:67042000-67044000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:67042000-67045800 Enhancers Primary hematopoietic stem cells blood
27 chr1:67042000-67046200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:67042000-67046400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr1:67042200-67042800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr1:67042200-67045000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:67042400-67042800 Enhancers Primary hematopoietic stem cells short term culture blood
32 chr1:67042400-67042800 Enhancers HUVEC blood vessel
33 chr1:67042400-67043000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
34 chr1:67042400-67043000 Enhancers Left Ventricle heart
35 chr1:67042400-67043000 Enhancers Sigmoid Colon Sigmoid Colon
36 chr1:67042400-67043000 Enhancers HSMM muscle
37 chr1:67042400-67043200 Enhancers Brain Anterior Caudate brain
38 chr1:67042400-67043600 Enhancers Brain Cingulate Gyrus brain
39 chr1:67042400-67044200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr1:67042600-67042800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
41 chr1:67042600-67042800 Enhancers HMEC breast
42 chr1:67042600-67043000 Enhancers Cortex derived primary cultured neurospheres brain
43 chr1:67042600-67043000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
44 chr1:67042600-67043000 Enhancers Brain Germinal Matrix brain
45 chr1:67042600-67043000 Enhancers Small Intestine intestine
46 chr1:67042600-67043400 Weak transcription Muscle Satellite Cultured Cells --
47 chr1:67042600-67043400 Weak transcription Aorta Aorta
48 chr1:67042600-67043600 Enhancers Fetal Brain Male brain
49 chr1:67042600-67044800 Enhancers Osteobl bone

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Last update: Aug 31, 2015