The 2.0 version of rSNPBase

Variant report

Variant rs72922915
Chromosome Location chr3:49420214-49420215
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49396800-49438800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr3:49397200-49423800 Weak transcription Fetal Heart heart
3 chr3:49399000-49448000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr3:49406000-49445200 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr3:49410600-49421800 Weak transcription K562 blood
6 chr3:49411000-49434600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr3:49411200-49423200 Weak transcription Primary hematopoietic stem cells blood
8 chr3:49411200-49423800 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr3:49413000-49421600 Weak transcription Rectal Smooth Muscle rectum
10 chr3:49413000-49422000 Weak transcription Pancreas Pancrea
11 chr3:49413000-49423200 Weak transcription Brain Anterior Caudate brain
12 chr3:49413000-49423800 Weak transcription HUVEC blood vessel
13 chr3:49413200-49423200 Weak transcription Primary T cells from cord blood blood
14 chr3:49413200-49423200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr3:49413200-49423200 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr3:49413200-49425400 Weak transcription Brain Hippocampus Middle brain
17 chr3:49413200-49425600 Weak transcription Hela-S3 cervix
18 chr3:49413200-49431800 Weak transcription Duodenum Mucosa Duodenum
19 chr3:49413200-49432000 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr3:49413200-49432000 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr3:49413200-49432000 Weak transcription Fetal Kidney kidney
22 chr3:49413200-49433200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr3:49413200-49435000 Weak transcription Brain Angular Gyrus brain
24 chr3:49413200-49441400 Weak transcription Aorta Aorta
25 chr3:49413200-49443000 Weak transcription Brain Cingulate Gyrus brain
26 chr3:49413200-49447400 Weak transcription H9 Cell Line embryonic stem cell
27 chr3:49413400-49423200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr3:49413400-49425400 Weak transcription Thymus Thymus
29 chr3:49413400-49425400 Weak transcription Dnd41 blood
30 chr3:49413400-49425600 Weak transcription Fetal Intestine Large intestine
31 chr3:49413400-49431800 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr3:49413400-49433600 Weak transcription Brain Germinal Matrix brain
33 chr3:49413400-49439000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr3:49413600-49430600 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr3:49413600-49432000 Weak transcription Fetal Lung lung
36 chr3:49413600-49433200 Weak transcription Colonic Mucosa Colon
37 chr3:49413600-49441000 Weak transcription Fetal Brain Female brain
38 chr3:49413800-49425600 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr3:49414400-49423200 Enhancers Primary Natural Killer cells fromperipheralblood blood
40 chr3:49414600-49421400 Enhancers Primary T cells fromperipheralblood blood
41 chr3:49414600-49424400 Enhancers Primary T helper naive cells fromperipheralblood blood
42 chr3:49414600-49424400 Enhancers Primary T helper cells PMA-I stimulated --
43 chr3:49414800-49424200 Enhancers Primary T helper cells fromperipheralblood blood
44 chr3:49415400-49423200 Weak transcription A549 lung
45 chr3:49415800-49425400 Weak transcription Fetal Thymus thymus
46 chr3:49416200-49421000 Weak transcription Stomach Mucosa stomach
47 chr3:49416200-49422000 Weak transcription Lung lung
48 chr3:49416200-49422000 Weak transcription Right Atrium heart
49 chr3:49416200-49423600 Weak transcription Liver Liver
50 chr3:49416200-49425400 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015