Variant report

Variant	rs72922933
Chromosome Location	chr6:72416342-72416343
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs72929958	1.00[AMR][1000 genomes]
rs72940817	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830686	chr6:72336896-72534267	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:72415400-72416400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr6:72416200-72416800	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr6:72416200-72416800	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr6:72416200-72416800	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr6:72416200-72417000	Enhancers	iPS-20b Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links