Variant report

Variant	rs72925372
Chromosome Location	chr4:128065022-128065023
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11930387	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17012029	1.00[EUR][1000 genomes]
rs6850340	1.00[EUR][1000 genomes]
rs73848050	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879914	chr4:128005362-128123638	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128061000-128065600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr4:128061200-128067800	Weak transcription	Rectal Smooth Muscle	rectum
3	chr4:128062600-128066000	Enhancers	Muscle Satellite Cultured Cells	--
4	chr4:128062600-128066800	Enhancers	HSMMtube	muscle
5	chr4:128062600-128067000	Enhancers	HSMM	muscle
6	chr4:128063200-128066200	Weak transcription	Adipose Nuclei	Adipose
7	chr4:128063800-128065400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr4:128064000-128065400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr4:128064200-128065800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr4:128064200-128066200	Weak transcription	Stomach Smooth Muscle	stomach
11	chr4:128064600-128065200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr4:128064800-128065200	Enhancers	Fetal Stomach	stomach
13	chr4:128064800-128065800	Enhancers	NHDF-Ad	bronchial
14	chr4:128065000-128065200	Enhancers	Osteobl	bone
15	chr4:128065000-128066200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links