The 2.0 version of rSNPBase

Variant report

Variant rs72927907
Chromosome Location chr1:67446054-67446055
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67396800-67458200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:67396800-67459000 Weak transcription Esophagus oesophagus
3 chr1:67397600-67457600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr1:67400600-67466600 Weak transcription Aorta Aorta
5 chr1:67406400-67455600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
6 chr1:67408200-67448000 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr1:67408200-67450200 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:67409400-67446400 Weak transcription Brain Angular Gyrus brain
9 chr1:67409400-67447600 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:67410600-67446400 Strong transcription Rectal Mucosa Donor 31 rectum
11 chr1:67410600-67453200 Strong transcription iPS-20b Cell Line embryonic stem cell
12 chr1:67411000-67455000 Strong transcription HUES64 Cell Line embryonic stem cell
13 chr1:67411200-67454800 Strong transcription HUES6 Cell Line embryonic stem cell
14 chr1:67411200-67456200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr1:67413400-67447000 Strong transcription Primary monocytes fromperipheralblood blood
16 chr1:67413400-67456400 Strong transcription Monocytes-CD14+_RO01746 blood
17 chr1:67413600-67446400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:67414600-67462000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr1:67416600-67446400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr1:67417000-67462000 Weak transcription Right Ventricle heart
21 chr1:67417400-67446200 Strong transcription HSMM muscle
22 chr1:67418000-67446400 Strong transcription Osteobl bone
23 chr1:67418200-67447000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr1:67420600-67467000 Weak transcription Gastric stomach
25 chr1:67420800-67446200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:67420800-67446600 Weak transcription Stomach Mucosa stomach
27 chr1:67427200-67455200 Strong transcription Primary hematopoietic stem cells short term culture blood
28 chr1:67427400-67446400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr1:67430600-67459000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr1:67431800-67446400 Strong transcription Primary T cells fromperipheralblood blood
31 chr1:67431800-67446400 Weak transcription Small Intestine intestine
32 chr1:67431800-67448200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr1:67432000-67454000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr1:67432000-67465600 Weak transcription Pancreas Pancrea
35 chr1:67432000-67468600 Weak transcription Lung lung
36 chr1:67433200-67447600 Weak transcription Fetal Brain Male brain
37 chr1:67433200-67456600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:67433600-67446600 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr1:67434000-67455400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:67435800-67453000 Strong transcription Placenta Placenta
41 chr1:67436400-67453400 Strong transcription HMEC breast
42 chr1:67436600-67457000 Strong transcription NH-A brain
43 chr1:67437000-67446400 Weak transcription Brain Inferior Temporal Lobe brain
44 chr1:67437400-67446400 Weak transcription Primary T killer memory cells from peripheral blood blood
45 chr1:67439200-67446400 Weak transcription Pancreatic Islets Pancreatic Islet
46 chr1:67439200-67456400 Strong transcription Primary neutrophils fromperipheralblood blood
47 chr1:67439800-67456400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr1:67440000-67446200 Strong transcription Fetal Lung lung
49 chr1:67440000-67452800 Strong transcription Primary B cells from peripheral blood blood
50 chr1:67440000-67453200 Strong transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015