Variant report

Variant	rs72930688
Chromosome Location	chr2:205301477-205301478
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs72930619	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875721	chr2:205232072-205306024	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:205300400-205302200	Enhancers	Colon Smooth Muscle	Colon
2	chr2:205300600-205304000	Enhancers	HepG2	liver
3	chr2:205301000-205302000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr2:205301000-205302200	Weak transcription	Pancreas	Pancrea
5	chr2:205301000-205302600	Enhancers	Brain Hippocampus Middle	brain
6	chr2:205301200-205302200	Weak transcription	Stomach Mucosa	stomach
7	chr2:205301400-205301800	Weak transcription	K562	blood
8	chr2:205301400-205302200	Weak transcription	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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