Variant report

Variant	rs72934342
Chromosome Location	chr2:211382251-211382252
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10515952	1.00[ASN][1000 genomes]
rs10932348	1.00[ASN][1000 genomes]
rs10932349	1.00[ASN][1000 genomes]
rs16844852	1.00[ASN][1000 genomes]
rs16844854	1.00[ASN][1000 genomes]
rs17832175	1.00[ASN][1000 genomes]
rs6720137	1.00[ASN][1000 genomes]
rs6727826	1.00[ASN][1000 genomes]
rs6748782	1.00[ASN][1000 genomes]
rs6749137	1.00[ASN][1000 genomes]
rs72944132	1.00[ASN][1000 genomes]
rs72944134	1.00[ASN][1000 genomes]
rs72944148	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3398091	chr2:211315261-211634200	Active TSS Flanking Active TSS Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:211380200-211384400	Enhancers	Duodenum Mucosa	Duodenum
2	chr2:211380800-211383600	Enhancers	Fetal Intestine Small	intestine
3	chr2:211382000-211382600	Enhancers	HepG2	liver
4	chr2:211382200-211384600	Enhancers	Fetal Intestine Large	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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