The 2.0 version of rSNPBase

Variant report

Variant rs72936855
Chromosome Location chr2:86152233-86152234
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86135400-86152600 Weak transcription Psoas Muscle Psoas
2 chr2:86142200-86155800 Weak transcription Primary T cells from cord blood blood
3 chr2:86142400-86157800 Weak transcription Aorta Aorta
4 chr2:86147200-86155000 Enhancers Brain Hippocampus Middle brain
5 chr2:86148600-86156200 Weak transcription NH-A brain
6 chr2:86149200-86152800 Enhancers Liver Liver
7 chr2:86149400-86157400 Weak transcription Pancreas Pancrea
8 chr2:86149800-86157200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr2:86149800-86157400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr2:86150400-86152800 Enhancers Hela-S3 cervix
11 chr2:86150400-86155000 Enhancers Brain Substantia Nigra brain
12 chr2:86150400-86155200 Enhancers Brain Inferior Temporal Lobe brain
13 chr2:86150400-86155200 Enhancers A549 lung
14 chr2:86150800-86152400 Enhancers GM12878-XiMat blood
15 chr2:86150800-86152800 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr2:86150800-86153200 Enhancers Fetal Thymus thymus
17 chr2:86150800-86155000 Enhancers Brain Cingulate Gyrus brain
18 chr2:86151000-86152600 Enhancers Muscle Satellite Cultured Cells --
19 chr2:86151000-86152800 Enhancers Fetal Adrenal Gland Adrenal Gland
20 chr2:86151000-86152800 Enhancers Right Atrium heart
21 chr2:86151000-86152800 Enhancers HMEC breast
22 chr2:86151000-86153400 Enhancers Adipose Nuclei Adipose
23 chr2:86151000-86154800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr2:86151000-86155000 Enhancers Brain Angular Gyrus brain
25 chr2:86151400-86152600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr2:86151400-86152800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr2:86151600-86152400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr2:86151600-86152400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
29 chr2:86151600-86152400 Enhancers NHEK skin
30 chr2:86151600-86152600 Enhancers Cortex derived primary cultured neurospheres brain
31 chr2:86151600-86152600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
32 chr2:86151600-86152600 Enhancers HSMM muscle
33 chr2:86151600-86152800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr2:86151600-86152800 Enhancers Thymus Thymus
35 chr2:86151600-86153000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
36 chr2:86151600-86153000 Enhancers Ovary ovary
37 chr2:86151600-86153200 Enhancers Fetal Muscle Leg muscle
38 chr2:86151600-86153200 Enhancers Lung lung
39 chr2:86151600-86153200 Enhancers Stomach Mucosa stomach
40 chr2:86151600-86155000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
41 chr2:86151600-86155200 Enhancers Brain Anterior Caudate brain
42 chr2:86151600-86156400 Enhancers Placenta Placenta
43 chr2:86151800-86152400 Enhancers Rectal Mucosa Donor 31 rectum
44 chr2:86151800-86152400 Enhancers Dnd41 blood
45 chr2:86151800-86152400 Enhancers K562 blood
46 chr2:86151800-86152600 Enhancers Duodenum Smooth Muscle Duodenum
47 chr2:86151800-86154000 Enhancers Skeletal Muscle Male skeletal muscle
48 chr2:86151800-86155200 Enhancers Spleen Spleen
49 chr2:86152000-86152400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr2:86152000-86152400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015