The 2.0 version of rSNPBase

Variant report

Variant rs72938276
Chromosome Location chr3:111623598-111623599
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111591600-111633200 Weak transcription Fetal Kidney kidney
2 chr3:111604000-111632200 Weak transcription Gastric stomach
3 chr3:111604400-111625600 Weak transcription Fetal Intestine Large intestine
4 chr3:111604400-111629400 Weak transcription Ovary ovary
5 chr3:111604400-111632200 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr3:111604800-111632000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr3:111605000-111629800 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr3:111610200-111627400 Weak transcription Aorta Aorta
9 chr3:111617600-111631800 Weak transcription H9 Cell Line embryonic stem cell
10 chr3:111618200-111628800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr3:111618800-111626400 Weak transcription Fetal Muscle Leg muscle
12 chr3:111619000-111623600 Weak transcription Fetal Muscle Trunk muscle
13 chr3:111619800-111624000 Enhancers HUVEC blood vessel
14 chr3:111620000-111643200 Weak transcription Esophagus oesophagus
15 chr3:111620400-111624000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr3:111620600-111624200 Enhancers NHDF-Ad bronchial
17 chr3:111620600-111624400 Enhancers HMEC breast
18 chr3:111620600-111626800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
19 chr3:111620800-111623600 Enhancers Placenta Amnion Placenta Amnion
20 chr3:111620800-111624400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr3:111621000-111624000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr3:111621000-111624200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr3:111621200-111626400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr3:111621600-111623600 Enhancers HSMM muscle
25 chr3:111621600-111624000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr3:111621600-111624000 Enhancers NHLF lung
27 chr3:111621600-111624200 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr3:111621800-111624000 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr3:111621800-111632200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr3:111622000-111623800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
31 chr3:111622000-111623800 Enhancers Adipose Nuclei Adipose
32 chr3:111622000-111624200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr3:111622000-111625600 Strong transcription Fetal Stomach stomach
34 chr3:111622400-111624200 Enhancers Skeletal Muscle Male skeletal muscle
35 chr3:111622400-111630400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr3:111622400-111630400 Weak transcription Pancreas Pancrea
37 chr3:111622600-111623800 Genic enhancers Placenta Placenta
38 chr3:111622600-111624200 Enhancers Muscle Satellite Cultured Cells --
39 chr3:111622600-111624200 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr3:111622600-111624200 Genic enhancers NH-A brain
41 chr3:111622600-111628400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr3:111622800-111623800 Enhancers HSMMtube muscle
43 chr3:111622800-111630200 Weak transcription Fetal Intestine Small intestine
44 chr3:111623000-111623600 Enhancers Right Ventricle heart
45 chr3:111623000-111624600 Enhancers Primary monocytes fromperipheralblood blood
46 chr3:111623200-111623600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr3:111623200-111623600 Enhancers Pancreatic Islets Pancreatic Islet
48 chr3:111623200-111623600 Enhancers Left Ventricle heart
49 chr3:111623200-111623800 Enhancers Liver Liver
50 chr3:111623200-111623800 Enhancers Fetal Lung lung

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Last update: Aug 31, 2015