Variant report

Variant	rs72944346
Chromosome Location	chr3:109422315-109422316
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs57404475	1.00[AFR][1000 genomes]
rs58388147	0.81[AFR][1000 genomes]
rs72940642	0.81[AFR][1000 genomes]
rs72940645	0.81[AFR][1000 genomes]
rs72940658	0.81[AFR][1000 genomes]
rs72940664	0.81[AFR][1000 genomes]
rs72940665	0.81[AFR][1000 genomes]
rs72940669	0.81[AFR][1000 genomes]
rs72942599	1.00[AFR][1000 genomes]
rs72944359	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv470827	chr3:109195046-109433855	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
2	nsv965391	chr3:109419757-109431296	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:109418600-109423600	Enhancers	Dnd41	blood
2	chr3:109421000-109422400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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