The 2.0 version of rSNPBase

Variant report

Variant rs72945952
Chromosome Location chr4:149088396-149088397
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:149041400-149092000 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr4:149045600-149104800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr4:149068000-149097400 Weak transcription Spleen Spleen
4 chr4:149076000-149094600 Weak transcription Fetal Stomach stomach
5 chr4:149083000-149088600 Enhancers Breast Myoepithelial Primary Cells Breast
6 chr4:149084000-149092200 Weak transcription Gastric stomach
7 chr4:149084000-149094400 Weak transcription Pancreas Pancrea
8 chr4:149084000-149106200 Weak transcription Lung lung
9 chr4:149085200-149092000 Weak transcription HMEC breast
10 chr4:149085200-149092400 Weak transcription Fetal Heart heart
11 chr4:149085400-149091200 Weak transcription NHEK skin
12 chr4:149085400-149092800 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr4:149086000-149091400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr4:149086200-149091000 Weak transcription Fetal Intestine Small intestine
15 chr4:149086200-149091600 Weak transcription Duodenum Mucosa Duodenum
16 chr4:149086200-149091600 Weak transcription Fetal Intestine Large intestine
17 chr4:149086200-149092200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr4:149086200-149092600 Weak transcription Small Intestine intestine
19 chr4:149086200-149095000 Weak transcription Stomach Mucosa stomach
20 chr4:149087000-149088400 Enhancers Brain Angular Gyrus brain
21 chr4:149087200-149088400 Enhancers Brain Anterior Caudate brain
22 chr4:149087200-149088400 Enhancers HUVEC blood vessel
23 chr4:149087400-149088400 Enhancers Right Ventricle heart
24 chr4:149087400-149089200 Enhancers Psoas Muscle Psoas
25 chr4:149087400-149091000 Enhancers Ovary ovary
26 chr4:149087600-149088400 Enhancers HSMMtube muscle
27 chr4:149087600-149089000 Weak transcription Aorta Aorta
28 chr4:149087600-149089200 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr4:149087600-149091200 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr4:149087600-149092200 Weak transcription Esophagus oesophagus
31 chr4:149087600-149092200 Weak transcription Left Ventricle heart
32 chr4:149087600-149092600 Weak transcription Colonic Mucosa Colon
33 chr4:149087600-149093400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr4:149087600-149094200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr4:149087600-149123400 Weak transcription Brain Cingulate Gyrus brain
36 chr4:149087800-149088400 Enhancers Muscle Satellite Cultured Cells --
37 chr4:149088000-149088400 Enhancers NHDF-Ad bronchial
38 chr4:149088000-149088600 Genic enhancers HSMM muscle
39 chr4:149088000-149113200 Weak transcription Adipose Nuclei Adipose
40 chr4:149088000-149113600 Weak transcription Rectal Smooth Muscle rectum
41 chr4:149088200-149088400 Enhancers Fetal Muscle Trunk muscle
42 chr4:149088200-149088600 Enhancers Fetal Kidney kidney

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Last update: Aug 31, 2015