The 2.0 version of rSNPBase

Variant report

Variant rs72949178
Chromosome Location chr4:144331264-144331265
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:144312800-144331400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr4:144312800-144336800 Weak transcription Fetal Muscle Trunk muscle
3 chr4:144313800-144332000 Weak transcription Placenta Amnion Placenta Amnion
4 chr4:144318200-144337000 Weak transcription Fetal Intestine Large intestine
5 chr4:144318200-144362400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr4:144319200-144336600 Weak transcription Fetal Kidney kidney
7 chr4:144322200-144334000 Enhancers Fetal Heart heart
8 chr4:144323200-144335800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr4:144324000-144332400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
10 chr4:144324600-144332800 Weak transcription HSMM muscle
11 chr4:144324800-144331800 Enhancers Brain Anterior Caudate brain
12 chr4:144324800-144332200 Enhancers Brain Hippocampus Middle brain
13 chr4:144324800-144332400 Enhancers Brain Angular Gyrus brain
14 chr4:144324800-144333200 Weak transcription Fetal Brain Female brain
15 chr4:144324800-144336800 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr4:144325800-144331800 Weak transcription HSMMtube muscle
17 chr4:144326000-144332000 Weak transcription Aorta Aorta
18 chr4:144326000-144336600 Weak transcription Placenta Placenta
19 chr4:144326200-144337200 Weak transcription Primary monocytes fromperipheralblood blood
20 chr4:144326600-144336600 Weak transcription Monocytes-CD14+_RO01746 blood
21 chr4:144326800-144333400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr4:144327200-144337200 Weak transcription Fetal Intestine Small intestine
23 chr4:144327400-144332800 Enhancers Brain Substantia Nigra brain
24 chr4:144327600-144337800 Weak transcription Colonic Mucosa Colon
25 chr4:144327800-144332000 Enhancers Brain Inferior Temporal Lobe brain
26 chr4:144327800-144361200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr4:144327800-144388200 Weak transcription HepG2 liver
28 chr4:144328000-144332000 Weak transcription Gastric stomach
29 chr4:144328000-144332000 Weak transcription Lung lung
30 chr4:144328000-144332000 Weak transcription Pancreas Pancrea
31 chr4:144328000-144332000 Enhancers Skeletal Muscle Female skeletal muscle
32 chr4:144328000-144332200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr4:144328000-144332600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr4:144328000-144333000 Weak transcription Stomach Mucosa stomach
35 chr4:144328000-144333600 Enhancers Colon Smooth Muscle Colon
36 chr4:144328000-144336400 Weak transcription Duodenum Mucosa Duodenum
37 chr4:144328000-144338600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr4:144328000-144338800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr4:144328000-144346400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr4:144328000-144359200 Weak transcription Esophagus oesophagus
41 chr4:144328200-144332000 Weak transcription Fetal Muscle Leg muscle
42 chr4:144328200-144332000 Weak transcription Ovary ovary
43 chr4:144328200-144332200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr4:144328200-144332800 Weak transcription Fetal Stomach stomach
45 chr4:144328200-144333200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr4:144328400-144331600 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr4:144328600-144331800 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr4:144328600-144337000 Weak transcription Liver Liver
49 chr4:144328800-144332000 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr4:144328800-144332200 Weak transcription NHLF lung

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Last update: Aug 31, 2015