The 2.0 version of rSNPBase

Variant report

Variant rs72960848
Chromosome Location chr1:92852755-92852756
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92804400-92853200 Weak transcription NHEK skin
2 chr1:92815000-92853200 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:92818800-92853000 Weak transcription Osteobl bone
4 chr1:92823600-92853200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:92825600-92852800 Weak transcription HMEC breast
6 chr1:92826200-92853000 Weak transcription Fetal Brain Male brain
7 chr1:92833400-92855000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr1:92833400-92856000 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr1:92833600-92852800 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr1:92834400-92855200 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr1:92835400-92855200 Weak transcription Hela-S3 cervix
12 chr1:92844200-92855600 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr1:92847000-92852800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:92847000-92853200 Weak transcription Psoas Muscle Psoas
15 chr1:92847000-92853800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr1:92847200-92854000 Weak transcription Brain Angular Gyrus brain
17 chr1:92849600-92853200 Strong transcription Cortex derived primary cultured neurospheres brain
18 chr1:92849600-92854800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:92849600-92854800 ZNF genes & repeats Aorta Aorta
20 chr1:92849600-92855200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
21 chr1:92849800-92854000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:92849800-92855200 ZNF genes & repeats Fetal Intestine Small intestine
23 chr1:92850000-92855200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
24 chr1:92850200-92855000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr1:92850200-92855000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
26 chr1:92850200-92855200 ZNF genes & repeats Liver Liver
27 chr1:92850200-92855200 ZNF genes & repeats Fetal Brain Female brain
28 chr1:92850200-92855400 ZNF genes & repeats Fetal Lung lung
29 chr1:92850400-92853200 Strong transcription Fetal Stomach stomach
30 chr1:92850600-92853200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:92850800-92853200 Weak transcription H9 Cell Line embryonic stem cell
32 chr1:92850800-92853800 Strong transcription Primary T helper cells fromperipheralblood blood
33 chr1:92850800-92855000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:92851000-92852800 ZNF genes & repeats Stomach Smooth Muscle stomach
35 chr1:92851200-92854800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:92851200-92855200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:92851200-92855400 Strong transcription Skeletal Muscle Female skeletal muscle
38 chr1:92851400-92853000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:92851400-92853000 Strong transcription Fetal Intestine Large intestine
40 chr1:92851400-92853200 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr1:92851400-92853200 Strong transcription Thymus Thymus
42 chr1:92851400-92853200 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr1:92851400-92853600 Strong transcription Primary T helper naive cells fromperipheralblood blood
44 chr1:92851400-92853600 Strong transcription HSMMtube muscle
45 chr1:92851400-92853800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr1:92851400-92853800 Strong transcription Fetal Kidney kidney
47 chr1:92851400-92853800 Strong transcription Placenta Placenta
48 chr1:92851400-92853800 Strong transcription Gastric stomach
49 chr1:92851400-92853800 Strong transcription HSMM muscle
50 chr1:92851400-92853800 Weak transcription NH-A brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015