Variant report

Variant	rs72961896
Chromosome Location	chr11:87137225-87137226
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:87134513..87137251-chr11:87164100..87165972,2	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs17759556	1.00[AMR][1000 genomes]
rs17821201	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043562	chr11:86755535-87547185	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv541120	chr11:86755535-87547185	Bivalent Enhancer Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
3	nsv1046288	chr11:86757573-87158571	Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer Strong transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
4	nsv555714	chr11:87058981-87399218	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	nsv1039172	chr11:87068731-87385458	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:87131000-87143000	Weak transcription	Adipose Nuclei	Adipose
2	chr11:87135000-87138600	Weak transcription	Pancreas	Pancrea
3	chr11:87135600-87137800	Enhancers	NHDF-Ad	bronchial
4	chr11:87135600-87138000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr11:87135600-87140600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr11:87135800-87137600	Enhancers	Muscle Satellite Cultured Cells	--
7	chr11:87135800-87138400	Enhancers	HSMM	muscle
8	chr11:87135800-87140200	Enhancers	Osteobl	bone
9	chr11:87136000-87137400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr11:87136000-87137600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr11:87136000-87138400	Enhancers	NHLF	lung
12	chr11:87136200-87138000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
13	chr11:87136200-87138000	Enhancers	NH-A	brain
14	chr11:87136200-87138200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr11:87136400-87137800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr11:87136400-87137800	Enhancers	HUES6 Cell Line	embryonic stem cell
17	chr11:87136800-87137400	Enhancers	H9 Cell Line	embryonic stem cell
18	chr11:87136800-87137400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
19	chr11:87137000-87138400	Enhancers	ES-I3 Cell Line	embryonic stem cell
20	chr11:87137000-87139200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr11:87137000-87139200	Weak transcription	Placenta Amnion	Placenta Amnion
22	chr11:87137000-87139200	Weak transcription	NHEK	skin
23	chr11:87137000-87147000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
24	chr11:87137200-87137600	Enhancers	iPS-20b Cell Line	embryonic stem cell
25	chr11:87137200-87137600	Weak transcription	HSMMtube	muscle
26	chr11:87137200-87137800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
27	chr11:87137200-87138000	Enhancers	HUES64 Cell Line	embryonic stem cell
28	chr11:87137200-87139000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr11:87137200-87139000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr11:87137200-87139000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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