Variant report

Variant rs72978396
Chromosome Location chr3:133658598-133658599
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:133647000-133661800 Weak transcription Gastric stomach
2 chr3:133647400-133661000 Weak transcription Fetal Thymus thymus
3 chr3:133647800-133661000 Weak transcription Lung lung
4 chr3:133650200-133662600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:133651800-133663400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr3:133654000-133662600 Weak transcription Fetal Intestine Large intestine
7 chr3:133654200-133659200 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr3:133654400-133661800 Weak transcription Colonic Mucosa Colon
9 chr3:133654400-133662200 Weak transcription Fetal Intestine Small intestine
10 chr3:133654400-133662600 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr3:133654400-133662600 Weak transcription Small Intestine intestine
12 chr3:133654600-133662600 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr3:133654800-133661400 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr3:133655000-133661400 Weak transcription Stomach Mucosa stomach
15 chr3:133655400-133658800 Enhancers Fetal Muscle Leg muscle
16 chr3:133655400-133660200 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr3:133655600-133662600 Weak transcription Fetal Kidney kidney
18 chr3:133656000-133661000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr3:133656200-133658600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
20 chr3:133656200-133659800 Weak transcription Primary hematopoietic stem cells blood
21 chr3:133656200-133660600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr3:133656600-133660200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr3:133656800-133660200 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr3:133656800-133660400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr3:133656800-133662600 Weak transcription Brain Anterior Caudate brain
26 chr3:133657000-133661000 Weak transcription H1 Cell Line embryonic stem cell
27 chr3:133657000-133661800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr3:133657000-133662200 Weak transcription NHDF-Ad bronchial
29 chr3:133657000-133662600 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr3:133657200-133661400 Weak transcription Fetal Stomach stomach
31 chr3:133657400-133661200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr3:133657400-133662600 Weak transcription Left Ventricle heart
33 chr3:133657400-133663000 Weak transcription Aorta Aorta
34 chr3:133657800-133659000 Weak transcription Spleen Spleen
35 chr3:133658000-133658600 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr3:133658200-133658600 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr3:133658200-133658600 Enhancers Right Atrium heart
38 chr3:133658200-133659600 Weak transcription Fetal Muscle Trunk muscle
39 chr3:133658200-133659800 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr3:133658400-133661800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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