Variant report

Variant	rs72982193
Chromosome Location	chr11:102427372-102427373
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs72982103	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1035567	chr11:102264516-102431607	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	esv1815657	chr11:102413582-102490794	Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:102416400-102429400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:102416800-102434400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr11:102419600-102429200	Weak transcription	Lung	lung
4	chr11:102423600-102427400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr11:102423600-102430000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr11:102424000-102428800	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr11:102424000-102432200	Weak transcription	Rectal Mucosa Donor 31	rectum
8	chr11:102424600-102429400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr11:102424600-102431000	Weak transcription	Placenta Amnion	Placenta Amnion
10	chr11:102425400-102430400	Weak transcription	HMEC	breast
11	chr11:102425400-102431200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr11:102426200-102427400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr11:102426200-102430400	Weak transcription	HSMMtube	muscle
14	chr11:102426200-102431400	Weak transcription	A549	lung
15	chr11:102427200-102427600	Enhancers	Cortex derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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