The 2.0 version of rSNPBase

Variant report

Variant rs72998192
Chromosome Location chr1:114504211-114504212
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114479000-114517600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:114484000-114510400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:114484000-114510400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr1:114484000-114511200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:114484200-114504800 Weak transcription Esophagus oesophagus
6 chr1:114484200-114505600 Weak transcription H9 Cell Line embryonic stem cell
7 chr1:114484400-114510400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr1:114485000-114510400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:114489600-114505800 Weak transcription Gastric stomach
10 chr1:114489800-114510400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:114490000-114505600 Weak transcription Aorta Aorta
12 chr1:114490200-114507200 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr1:114490200-114510800 Weak transcription A549 lung
14 chr1:114490400-114505000 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr1:114490600-114512000 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr1:114492800-114518600 Strong transcription Dnd41 blood
17 chr1:114493400-114517600 Strong transcription Fetal Thymus thymus
18 chr1:114495400-114506600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:114495400-114507200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr1:114495400-114517400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr1:114495600-114508600 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr1:114495800-114516800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:114495800-114518200 Strong transcription Primary B cells from peripheral blood blood
24 chr1:114496000-114517000 Strong transcription Primary hematopoietic stem cells short term culture blood
25 chr1:114496400-114516000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:114496400-114516400 Strong transcription Rectal Mucosa Donor 29 rectum
27 chr1:114496400-114517000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:114496400-114517200 Strong transcription Primary monocytes fromperipheralblood blood
29 chr1:114496400-114517400 Strong transcription Primary neutrophils fromperipheralblood blood
30 chr1:114496400-114517600 Strong transcription Duodenum Mucosa Duodenum
31 chr1:114496400-114518200 Strong transcription K562 blood
32 chr1:114496400-114519400 Strong transcription Primary T regulatory cells fromperipheralblood blood
33 chr1:114496600-114506200 Strong transcription HUES48 Cell Line embryonic stem cell
34 chr1:114496600-114518800 Strong transcription Primary B cells from cord blood blood
35 chr1:114496800-114508800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr1:114497000-114516400 Strong transcription Fetal Intestine Large intestine
37 chr1:114497000-114517000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr1:114497200-114506600 Strong transcription HUES64 Cell Line embryonic stem cell
39 chr1:114497200-114516400 Strong transcription Primary hematopoietic stem cells blood
40 chr1:114497200-114516400 Strong transcription GM12878-XiMat blood
41 chr1:114497600-114517600 Strong transcription HUES6 Cell Line embryonic stem cell
42 chr1:114497800-114517400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr1:114498000-114507800 Strong transcription Skeletal Muscle Female skeletal muscle
44 chr1:114498000-114517400 Strong transcription Primary T helper cells fromperipheralblood blood
45 chr1:114498800-114518200 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr1:114499600-114511200 Weak transcription Stomach Mucosa stomach
47 chr1:114499800-114504800 Weak transcription Brain Cingulate Gyrus brain
48 chr1:114500000-114505000 Weak transcription Placenta Amnion Placenta Amnion
49 chr1:114500000-114505000 Weak transcription Rectal Smooth Muscle rectum
50 chr1:114500000-114517600 Strong transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015