Variant report

Variant	rs72999729
Chromosome Location	chr4:174945299-174945300
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs59050730	1.00[AMR][1000 genomes]
rs59605960	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60199504	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72993907	1.00[AMR][1000 genomes]
rs72999710	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72999712	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830155	chr4:174943809-175136483	Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:174944600-174945400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr4:174944800-174945400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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