Variant report

Variant	rs73008043
Chromosome Location	chr6:147193224-147193225
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs13209242	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs55913315	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs67559774	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs71566459	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830838	chr6:147090745-147274669	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147182200-147197600	Weak transcription	Pancreas	Pancrea
2	chr6:147189800-147196400	Enhancers	K562	blood
3	chr6:147191200-147193400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr6:147192200-147193400	Enhancers	Muscle Satellite Cultured Cells	--
5	chr6:147192400-147193400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr6:147192400-147195800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr6:147192400-147196600	Weak transcription	Primary neutrophils fromperipheralblood	blood
8	chr6:147192400-147197000	Weak transcription	Primary monocytes fromperipheralblood	blood
9	chr6:147192400-147197400	Weak transcription	Primary B cells from peripheral blood	blood
10	chr6:147192600-147193600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr6:147192600-147196000	Weak transcription	Monocytes-CD14+_RO01746	blood
12	chr6:147192600-147196800	Weak transcription	Primary hematopoietic stem cells	blood
13	chr6:147192800-147193600	Enhancers	NHDF-Ad	bronchial
14	chr6:147192800-147193800	Enhancers	HepG2	liver
15	chr6:147193000-147193400	Enhancers	Liver	Liver
16	chr6:147193000-147193400	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
17	chr6:147193000-147193600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr6:147193000-147200800	Weak transcription	Esophagus	oesophagus

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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