Variant report

Variant	rs73008679
Chromosome Location	chr11:119743230-119743231
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs34051198	0.96[AMR][1000 genomes]
rs73008657	0.92[AMR][1000 genomes]
rs73008672	0.96[AMR][1000 genomes]
rs73008675	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73008677	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73008681	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73008683	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73008690	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:119726400-119747000	Weak transcription	Right Atrium	heart
2	chr11:119739000-119745200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr11:119739200-119748400	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr11:119739200-119750600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr11:119743000-119745600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr11:119743200-119743600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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