Variant report

Variant	rs73012756
Chromosome Location	chr3:144283302-144283303
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs6762684	1.00[AFR][1000 genomes]
rs6802163	1.00[AFR][1000 genomes]
rs73009057	1.00[AMR][1000 genomes]
rs73009069	1.00[AMR][1000 genomes]
rs73012753	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73014733	1.00[AFR][1000 genomes]
rs73014736	1.00[AFR][1000 genomes]
rs73014737	1.00[AFR][1000 genomes]
rs73014740	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:29 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532633	chr3:143802417-144440646	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv591928	chr3:144050897-144822081	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv2756108	chr3:144177836-144301659	Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv877571	chr3:144188561-144291254	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	esv3379740	chr3:144225847-144433818	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	nsv1010388	chr3:144236022-144326640	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
7	esv2757895	chr3:144236202-144391387	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
8	esv2759185	chr3:144236202-144391387	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
9	nsv1013350	chr3:144239415-144326640	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
10	nsv536754	chr3:144239415-144326640	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
11	nsv877572	chr3:144244265-144312402	Weak transcription Flanking Active TSS Enhancers Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
12	nsv1012719	chr3:144264442-144283362	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
13	nsv877573	chr3:144265840-144323993	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
14	nsv1014395	chr3:144268563-144283849	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
15	nsv437344	chr3:144277333-144302713	Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
16	nsv437345	chr3:144277333-144302713	Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
17	nsv436364	chr3:144280834-144292686	Enhancers	n/a	n/a	inside rSNPs	diseases
18	nsv10335	chr3:144280969-144292155	Enhancers	n/a	n/a	inside rSNPs	diseases
19	esv3462598	chr3:144281390-144292692	Enhancers	n/a	n/a	inside rSNPs	diseases
20	esv3462600	chr3:144281437-144292669	Enhancers	n/a	n/a	inside rSNPs	diseases
21	esv3462599	chr3:144281455-144292653	Enhancers	n/a	n/a	inside rSNPs	diseases
22	esv3462601	chr3:144281461-144292618	Enhancers	n/a	n/a	inside rSNPs	diseases
23	esv20804	chr3:144281519-144292534	Enhancers	n/a	n/a	inside rSNPs	diseases
24	esv3462602	chr3:144281525-144292588	Enhancers	n/a	n/a	inside rSNPs	diseases
25	nsv1009227	chr3:144283031-144294326	Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
26	nsv514996	chr3:144283038-144284382	Enhancers	n/a	n/a	inside rSNPs	diseases
27	esv2421861	chr3:144283043-144287715	Enhancers	n/a	n/a	inside rSNPs	diseases
28	esv2760737	chr3:144283043-144287715	Enhancers	n/a	n/a	inside rSNPs	diseases
29	nsv441842	chr3:144283043-144287715	Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:144282600-144283600	Enhancers	HUVEC	blood vessel
2	chr3:144282800-144283400	Enhancers	Muscle Satellite Cultured Cells	--
3	chr3:144282800-144283400	Enhancers	Skeletal Muscle Male	skeletal muscle

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