Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr2:173175868-173176930	K562	blood:	n/a	n/a
2	POLR2A	chr2:173176494-173177155	HUVEC	blood vessel:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:173175651..173178554-chr2:173291420..173293345,2	MCF-7	breast:
2	chr2:173171784..173174881-chr2:173175432..173178185,3	K562	blood:

rSNPs within LD-proxies of this variant (count:13)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv3034	chr2:173160295-173200113	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv533927	chr2:173161637-173796894	Active TSS Enhancers Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Strong transcription Weak transcription Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:173170400-173177200	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr2:173170600-173178000	Weak transcription	Spleen	Spleen
3	chr2:173173000-173178000	Weak transcription	Lung	lung
4	chr2:173173000-173178200	Weak transcription	Fetal Thymus	thymus
5	chr2:173173000-173181600	Weak transcription	Right Atrium	heart
6	chr2:173173600-173178000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr2:173173800-173178000	Weak transcription	Right Ventricle	heart
8	chr2:173175800-173177200	Enhancers	HUVEC	blood vessel
9	chr2:173176000-173176600	Enhancers	Skeletal Muscle Male	skeletal muscle
10	chr2:173176000-173177200	Enhancers	Left Ventricle	heart
11	chr2:173176200-173178800	Enhancers	Fetal Muscle Leg	muscle
12	chr2:173176400-173176600	Enhancers	Placenta	Placenta
13	chr2:173176400-173176800	Enhancers	Cortex derived primary cultured neurospheres	brain
14	chr2:173176400-173176800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
15	chr2:173176400-173176800	Enhancers	Brain Substantia Nigra	brain
16	chr2:173176400-173177000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr2:173176400-173177000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr2:173176400-173177000	Enhancers	Brain Anterior Caudate	brain
19	chr2:173176400-173177200	Enhancers	Adipose Nuclei	Adipose
20	chr2:173176400-173177200	Enhancers	Pancreas	Pancrea
21	chr2:173176400-173177200	Enhancers	Stomach Mucosa	stomach
22	chr2:173176400-173177400	Enhancers	Fetal Muscle Trunk	muscle

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