Variant report

Variant	rs73017529
Chromosome Location	chr2:173879028-173879029
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:173850484..173852151-chr2:173876423..173879303,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs3769228	0.99[AFR][1000 genomes]
rs73017524	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834459	chr2:173735192-173926750	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:173835800-173886800	Weak transcription	Lung	lung
2	chr2:173856000-173885200	Weak transcription	Brain Anterior Caudate	brain
3	chr2:173856200-173882400	Weak transcription	Left Ventricle	heart
4	chr2:173856200-173892600	Weak transcription	Brain Angular Gyrus	brain
5	chr2:173861000-173888000	Weak transcription	Fetal Stomach	stomach
6	chr2:173862200-173881800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr2:173862200-173883600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr2:173867800-173880800	Weak transcription	Liver	Liver
9	chr2:173868000-173902000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr2:173868600-173892200	Weak transcription	Fetal Intestine Large	intestine
11	chr2:173871000-173881200	Weak transcription	Ovary	ovary
12	chr2:173871000-173884400	Weak transcription	Cortex derived primary cultured neurospheres	brain
13	chr2:173871000-173886000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
14	chr2:173871200-173881000	Weak transcription	Fetal Heart	heart
15	chr2:173877200-173901600	Weak transcription	Gastric	stomach
16	chr2:173877800-173879200	Enhancers	Adipose Nuclei	Adipose
17	chr2:173877800-173879400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr2:173877800-173887800	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr2:173878200-173886600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr2:173878600-173879400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
21	chr2:173878800-173879200	Enhancers	H1 Cell Line	embryonic stem cell
22	chr2:173879000-173879200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr2:173879000-173882400	Weak transcription	Right Atrium	heart

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