Variant report

Variant	rs73017853
Chromosome Location	chr3:157387812-157387813
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs16828142	0.90[EUR][1000 genomes]
rs16828272	0.86[EUR][1000 genomes]
rs16828319	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7609979	0.90[EUR][1000 genomes]
rs7617685	0.90[EUR][1000 genomes]
rs7620316	0.90[EUR][1000 genomes]
rs9289993	0.90[EUR][1000 genomes]
rs9831253	0.90[EUR][1000 genomes]
rs9852603	0.90[EUR][1000 genomes]
rs9854033	0.90[EUR][1000 genomes]
rs9868804	0.90[EUR][1000 genomes]
rs9872195	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829767	chr3:157306411-157490444	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:157386600-157388000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr3:157387200-157388400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr3:157387200-157389000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr3:157387400-157388200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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