Variant report

Variant	rs73018804
Chromosome Location	chr2:173186352-173186353
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10182136	0.94[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs55639081	0.93[EUR][1000 genomes]
rs55998604	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs56004424	0.91[EUR][1000 genomes]
rs57200533	0.93[EUR][1000 genomes]
rs58198619	0.93[EUR][1000 genomes]
rs59279316	0.93[EUR][1000 genomes]
rs59465816	0.93[EUR][1000 genomes]
rs61071477	0.93[EUR][1000 genomes]
rs61286863	0.92[EUR][1000 genomes]
rs6742648	0.91[EUR][1000 genomes]
rs73016896	0.90[AFR][1000 genomes];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73018829	0.93[EUR][1000 genomes]
rs7588553	0.91[EUR][1000 genomes]
rs7591203	0.93[EUR][1000 genomes]
rs7602327	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv3034	chr2:173160295-173200113	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv533927	chr2:173161637-173796894	Active TSS Enhancers Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Strong transcription Weak transcription Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
3	esv3496927	chr2:173179301-173186587	Weak transcription Active TSS ZNF genes & repeats	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
4	esv3496931	chr2:173179912-173186416	ZNF genes & repeats Active TSS Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:173186200-173186600	ZNF genes & repeats	Fetal Kidney	kidney

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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