Variant report

Variant	rs73024344
Chromosome Location	chr3:159324847-159324848
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11915464	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58085612	0.88[AFR][1000 genomes]
rs73024315	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73024342	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998949	chr3:158774806-159394550	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:159322400-159327200	Weak transcription	NH-A	brain
2	chr3:159322600-159327200	Weak transcription	Osteobl	bone
3	chr3:159323400-159325600	Weak transcription	Fetal Heart	heart
4	chr3:159324600-159326600	Weak transcription	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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