Variant report

Variant	rs73031794
Chromosome Location	chr2:180277117-180277118
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs73033703	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73033713	0.83[AMR][1000 genomes]
rs73033786	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv962512	chr2:180271870-180286262	Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180275600-180277200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr2:180275800-180277400	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr2:180275800-180277400	Enhancers	Muscle Satellite Cultured Cells	--
4	chr2:180275800-180277400	Enhancers	Osteobl	bone
5	chr2:180276600-180277200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr2:180276600-180277600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr2:180276800-180277200	Enhancers	HSMM	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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