Variant report

Variant	rs73037072
Chromosome Location	chr2:181850796-181850797
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:181850460..181852224-chr2:181912252..181913801,2	K562	blood:
2	chr2:181823528..181825783-chr2:181849129..181851147,2	K562	blood:
3	chr2:181849955..181852390-chr2:181948702..181951416,2	K562	blood:
4	chr2:181849540..181852306-chr2:181871316..181873552,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs73041031	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875476	chr2:181767757-181854997	Weak transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:114 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:181846400-181859200	Weak transcription	Esophagus	oesophagus
2	chr2:181846400-181868600	Weak transcription	Gastric	stomach
3	chr2:181846600-181852600	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr2:181846600-181872400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr2:181846800-181851000	Enhancers	Brain Substantia Nigra	brain
6	chr2:181847000-181850800	Weak transcription	Left Ventricle	heart
7	chr2:181847000-181851000	Enhancers	Rectal Smooth Muscle	rectum
8	chr2:181847000-181855000	Weak transcription	Primary T cells fromperipheralblood	blood
9	chr2:181847000-181856400	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr2:181847000-181857600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr2:181847000-181858800	Weak transcription	Colonic Mucosa	Colon
12	chr2:181847000-181859200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr2:181847000-181862400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr2:181847000-181862800	Weak transcription	Placenta	Placenta
15	chr2:181847000-181870000	Weak transcription	Pancreas	Pancrea
16	chr2:181847000-181873200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr2:181847200-181851400	Enhancers	Colon Smooth Muscle	Colon
18	chr2:181847200-181858800	Weak transcription	Primary neutrophils fromperipheralblood	blood
19	chr2:181847400-181870000	Weak transcription	Right Ventricle	heart
20	chr2:181847600-181864200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
21	chr2:181847600-181868400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
22	chr2:181847800-181854400	Weak transcription	Primary monocytes fromperipheralblood	blood
23	chr2:181848400-181851200	Enhancers	Brain Cingulate Gyrus	brain
24	chr2:181848800-181850800	Genic enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr2:181848800-181851200	Enhancers	Skeletal Muscle Male	skeletal muscle
26	chr2:181848800-181856200	Weak transcription	Psoas Muscle	Psoas
27	chr2:181848800-181856400	Weak transcription	Ovary	ovary
28	chr2:181849000-181850800	Enhancers	Liver	Liver
29	chr2:181849000-181851000	Genic enhancers	Fetal Lung	lung
30	chr2:181849000-181851200	Enhancers	Skeletal Muscle Female	skeletal muscle
31	chr2:181849000-181852200	Weak transcription	H1 Cell Line	embryonic stem cell
32	chr2:181849000-181856200	Weak transcription	Aorta	Aorta
33	chr2:181849000-181856200	Weak transcription	Fetal Muscle Trunk	muscle
34	chr2:181849000-181862000	Weak transcription	Primary B cells from peripheral blood	blood
35	chr2:181849000-181872800	Weak transcription	Fetal Intestine Large	intestine
36	chr2:181849200-181850800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
37	chr2:181849200-181850800	Transcr. at gene 5' and 3'	Fetal Kidney	kidney
38	chr2:181849200-181851000	Enhancers	Cortex derived primary cultured neurospheres	brain
39	chr2:181849200-181851400	Enhancers	HepG2	liver
40	chr2:181849200-181854600	Weak transcription	Adipose Nuclei	Adipose
41	chr2:181849200-181855800	Weak transcription	Primary B cells from cord blood	blood
42	chr2:181849200-181860000	Weak transcription	Fetal Intestine Small	intestine
43	chr2:181849400-181850800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
44	chr2:181849400-181851000	Enhancers	HUES6 Cell Line	embryonic stem cell
45	chr2:181849400-181851000	Genic enhancers	K562	blood
46	chr2:181849400-181851200	Genic enhancers	HUES64 Cell Line	embryonic stem cell
47	chr2:181849400-181851200	Active TSS	Brain Germinal Matrix	brain
48	chr2:181849400-181854400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr2:181849400-181854800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
50	chr2:181849400-181855200	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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