Variant report

Variant	rs73043850
Chromosome Location	chr1:172806419-172806420
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:172799395..172801919-chr1:172804885..172806997,2	K562	blood:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs59954547	1.00[AFR][1000 genomes]
rs73043855	1.00[AFR][1000 genomes]
rs73043870	1.00[AFR][1000 genomes]
rs73043877	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv947552	chr1:172794244-172807477	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172796000-172813800	Weak transcription	Small Intestine	intestine
2	chr1:172797800-172807000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr1:172797800-172807000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
4	chr1:172798200-172806600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
5	chr1:172801800-172806800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
6	chr1:172801800-172807000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
7	chr1:172801800-172808000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
8	chr1:172802000-172806800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
9	chr1:172803400-172806800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr1:172803600-172806800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr1:172803600-172806800	Weak transcription	Muscle Satellite Cultured Cells	--
12	chr1:172803600-172807400	Weak transcription	Dnd41	blood
13	chr1:172803800-172807200	Weak transcription	HSMM	muscle
14	chr1:172804800-172807000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr1:172806200-172807200	Enhancers	NHEK	skin
16	chr1:172806200-172807400	Enhancers	HMEC	breast
17	chr1:172806200-172807800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr1:172806200-172808400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr1:172806400-172807800	Enhancers	Primary T helper cells PMA-I stimulated	--
20	chr1:172806400-172808400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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