Variant report

Variant	rs73044647
Chromosome Location	chr5:16106715-16106716
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs56782886	1.00[AMR][1000 genomes]
rs57228803	1.00[AMR][1000 genomes]
rs6876118	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6880397	1.00[AMR][1000 genomes]
rs6897610	1.00[AMR][1000 genomes]
rs73044655	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73044670	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73044675	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73044679	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73044686	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73046507	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830217	chr5:16004704-16225229	Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:16104200-16108000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr5:16104600-16107200	Enhancers	Fetal Heart	heart
3	chr5:16105000-16106800	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr5:16105800-16108800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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