Variant report

Variant rs73047193
Chromosome Location chr7:5594599-5594600
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5572600-5594600 Weak transcription Right Atrium heart
2 chr7:5588800-5595000 Enhancers Placenta Placenta
3 chr7:5589400-5595000 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr7:5589400-5595200 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr7:5589600-5594600 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr7:5589600-5594800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr7:5589600-5595000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr7:5589600-5595000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr7:5589600-5595200 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr7:5591600-5595000 Enhancers Fetal Intestine Large intestine
11 chr7:5591800-5595000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr7:5592400-5594600 Flanking Active TSS Hela-S3 cervix
13 chr7:5592400-5595000 Enhancers Liver Liver
14 chr7:5592600-5594800 Enhancers Rectal Mucosa Donor 31 rectum
15 chr7:5592600-5595000 Enhancers Stomach Mucosa stomach
16 chr7:5592800-5594600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr7:5593000-5595000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr7:5593000-5595000 Enhancers Rectal Mucosa Donor 29 rectum
19 chr7:5593000-5595000 Enhancers NHEK skin
20 chr7:5593200-5595200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr7:5593400-5595000 Weak transcription HSMM muscle
22 chr7:5593400-5595200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr7:5593600-5595000 Weak transcription HSMMtube muscle
24 chr7:5593800-5594600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr7:5594000-5594600 Flanking Active TSS Rectal Smooth Muscle rectum
26 chr7:5594000-5595000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr7:5594000-5595000 Enhancers Primary T cells fromperipheralblood blood
28 chr7:5594000-5595000 Enhancers Primary Natural Killer cells fromperipheralblood blood
29 chr7:5594000-5595000 Enhancers Fetal Adrenal Gland Adrenal Gland
30 chr7:5594200-5594600 Enhancers H1 Cell Line embryonic stem cell
31 chr7:5594200-5594600 Flanking Active TSS HUES6 Cell Line embryonic stem cell
32 chr7:5594200-5594600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
33 chr7:5594200-5594600 Enhancers Adipose Nuclei Adipose
34 chr7:5594200-5594600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
35 chr7:5594200-5594600 Enhancers Skeletal Muscle Male skeletal muscle
36 chr7:5594200-5594600 Flanking Active TSS A549 lung
37 chr7:5594200-5594600 Flanking Active TSS GM12878-XiMat blood
38 chr7:5594200-5594600 Flanking Active TSS K562 blood
39 chr7:5594200-5594800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
40 chr7:5594200-5594800 Enhancers Primary B cells from peripheral blood blood
41 chr7:5594200-5594800 Enhancers Primary T helper naive cells fromperipheralblood blood
42 chr7:5594200-5595000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr7:5594200-5595000 Enhancers Primary hematopoietic stem cells blood
44 chr7:5594200-5595000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr7:5594200-5595000 Enhancers Brain Substantia Nigra brain
46 chr7:5594200-5595000 Enhancers Duodenum Mucosa Duodenum
47 chr7:5594200-5595000 Enhancers Left Ventricle heart
48 chr7:5594200-5595000 Enhancers Lung lung
49 chr7:5594200-5595000 Enhancers Placenta Amnion Placenta Amnion
50 chr7:5594200-5595000 Bivalent/Poised TSS Thymus Thymus

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